Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1828 ATGTCTTCATCACTAATCGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTACCGGTGATTGGATTCGGAACTGCTACCATCTTAGGCTCCGCTCCCGGCGATGACACCACCAAGGTGGCAGTGCTAGATGCCATTAAGCTCGGTTACAGGCACTTTGACACAGCTTCGATTTATGGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGCATTAAAACTTGGTCTCGTTGGATCTAGAGATGAACTCTTTGTCACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCATGCTTTGAAGAAAACACTTCAGTCACTGAAATTAGAATATGTAGATCTTTATTTGATCCACTGGCCCATTGCTTTGAAGCCTGGAAATTGGGACATGCCTTATGATGAAGAGGCCATGGCCCCATTTGACTTGAAGGGTGTGTGGACAAAAATGGAGGAATGCCAACAACTGGGGCTTACAAAAGGCATTGGAGTCAGCAACTTCAGTTGCAAAAAACTTGAAAATTTGCTCTCATTTGCCAATATTCCTCCTGCTGTCAACCAAATTAGGATGAATCCTACTTGGCAGCAAAAGAAGTTAAAAGACTACTGCCAAGCAAAAGGAATATTCATAACTGCCTACTCTCCTTTGGGAGCCAAAGGTACCGTTTGGGGTACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCAAATGATCATGGAAAATCTTTTGCTCAGGTATGTCTAAGATGGTTGTATGAGGAAGGCGTAACTATGGCACAAAATCTGGAAATATTTGATTGGTCACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCTTTCGTTGAAGTATGGACCAGCAAAGTTCGTTGAGGACCTTTGGGATGAAGAAAATTAA 924 0.4232 MSSSLIVPNVVLSNNRNLPVIGFGTATILGSAPGDDTTKVAVLDAIKLGYRHFDTASIYGSEEALGEAIAEALKLGLVGSRDELFVTSKLWCSDNHPDLVLHALKKTLQSLKLEYVDLYLIHWPIALKPGNWDMPYDEEAMAPFDLKGVWTKMEECQQLGLTKGIGVSNFSCKKLENLLSFANIPPAVNQIRMNPTWQQKKLKDYCQAKGIFITAYSPLGAKGTVWGTNDVMDNELLKEIANDHGKSFAQVCLRWLYEEGVTMAQNLEIFDWSLTKDDYEKINQVKQHLSLKYGPAKFVEDLWDEEN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1828 307 PRINTS Aldo-keto reductase signature 187 216 IPR020471 GO:0016491
Lja6g1828 307 PRINTS Aldo-keto reductase signature 153 170 IPR020471 GO:0016491
Lja6g1828 307 PRINTS Aldo-keto reductase signature 231 255 IPR020471 GO:0016491
Lja6g1828 307 PRINTS Aldo-keto reductase signature 106 124 IPR020471 GO:0016491
Lja6g1828 307 PRINTS Aldo-keto reductase signature 45 69 IPR020471 GO:0016491
Lja6g1828 307 PANTHER ALDO/KETO REDUCTASE 10 305 - -
Lja6g1828 307 ProSitePatterns Aldo/keto reductase family signature 1. 49 66 IPR018170 GO:0016491
Lja6g1828 307 Pfam Aldo/keto reductase family 21 262 IPR023210 -
Lja6g1828 307 PIRSF AKR 5 301 IPR020471 GO:0016491
Lja6g1828 307 ProSitePatterns Aldo/keto reductase family signature 2. 153 170 IPR018170 GO:0016491
Lja6g1828 307 Gene3D - 6 305 IPR036812 -
Lja6g1828 307 CDD AKR_AKR4A_4B 18 287 IPR044497 GO:0016616
Lja6g1828 307 SUPERFAMILY NAD(P)-linked oxidoreductase 9 289 IPR036812 -
Lja6g1828 307 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 10 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1828 Lja-Chr6 45600675 45603752 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1828 - - gmx:100788544 451.44