Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1736 ATGATCAAACAGATGCTTAGTAAATTACCACGCAGGCCTTCAAAATCATCTCACAGTGATTCTAATAGTGATGGAGGGGTGGTCAATGATGGGGTTGGTTCCAATGTCACCTTGAAAATCAATTCAGCTTCTTCAAAATCTTTGAATTTCGGTTCGGGTGGGTCGGATGAGGGGAATTGGACTTTTGTACTGCCCTCTACGAGTTCAGGTAAAACAAACCAAGCTAAGCTTAGTATAATACCACCACGCAAGCCTTCGAAATCAGCTCCTGCAGTTGCATCTCAAGTTGGTTCTGTAATGGCTCAAAGTGTTTATGAGGCTTTGCCGGCTTTTAGAGATGTTCCTAGTTCAGAAAAGCCGAATCTTTTTATCAGGAAGTTGAGTATGTGTTGTGTTGTGTTTGATTTTAATGATCCTGCGAAGCATCTTAAAGAGAAGGACGTCAAGAGGCAAACTTTGCTTGAGCTTGTTGATTATATTTCGTCCGTGAATTCGAAGTTCAATGAATTGACAATGCAGGAGGTCACGAAGATGGTGGCGGCAAACTTGTTTCGAACTCTGCCGTCTTCTAATCATGATGGTAAGGTTGCAGATGCTTATGATGTTGACGAAGAGGAACCCACGTTTGAACCAGCATGGAGTCATCTGCAGATTGTGTATGAAATTCTCTATAGGTTTGTGGCTTCATCAGAGACAGATGCGAAGCTTGCTAAACGATACATTGATCATTCATTTGTGTTGAAACTTCTTGACCTCTTTGACTCTGAGGACCAAAGAGAGAGGGAATACTTGAAGACTATTCTCCACCGCATTTATGGGAAGTTCATGGTACATCGGCCTTTCATTAGGAAAGCTATCAACAATATCTTTTACCAGTTCATGTTTGAGACTGAGAAACACAATGGAATTGCAGAGTTGCTGGAGATATTGGGAAGCATAATTAATGGATTCGCTCTACCTTTGAAAGAAGAGCATAAGCTGTTCCTTGTCCGTGCTCTGATCCCTCTTCACAGGCCGAAGTGTGTCTCTATGTATCATCAACAGCTTTCCTATTGCATCACTCTATTTGTTGAAAAAGATGTCAAGTTAGCAAATACGGTGATTAGAGGCATTTTGAAATATTGGCCCGTTACTAATAGTTCAAAGGAGGTAATGTTCCTTGGTGAACTGGAGGAAGTTTTAGAAGCCACTCAACCCGCAGAATTTCAGCGATGTGTGGTGCCATTGTTTCGTCAAATTGGTAGATGCCTCAACAGCCTACACTTCCAGGTTGCTGAAAGGGCACTGTTTCTGTGGAACAATGATCATATTCGAAATTTGATATTACAAAACTGCAAAGCAATACTACCTATAATCTTGCCTGCTTTGGAGACAAATACACAGGGCCACTGGAACCAAGCAGTTCAGAGTTTGACCCTGAACGTGAGAAAAATATTCTCAGATGCTGACCAGGCACTTTTTGATGAGTGCTTGATGAGATTCCAAGAAGATGAAATCAATGAACGGCAGAAGCAAGAGAAGCGGGAATCCATCTGGAAGAAATTGGAAGATGTGGCGGCATCGAAGGCTGTAAGCAATGAACCCGTCCTTGCCTCAAGATTCATGTCCTCTGTAGCCATTTCTACTAGGAGCTAA 1635 0.4214 MIKQMLSKLPRRPSKSSHSDSNSDGGVVNDGVGSNVTLKINSASSKSLNFGSGGSDEGNWTFVLPSTSSGKTNQAKLSIIPPRKPSKSAPAVASQVGSVMAQSVYEALPAFRDVPSSEKPNLFIRKLSMCCVVFDFNDPAKHLKEKDVKRQTLLELVDYISSVNSKFNELTMQEVTKMVAANLFRTLPSSNHDGKVADAYDVDEEEPTFEPAWSHLQIVYEILYRFVASSETDAKLAKRYIDHSFVLKLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYQFMFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHRPKCVSMYHQQLSYCITLFVEKDVKLANTVIRGILKYWPVTNSSKEVMFLGELEEVLEATQPAEFQRCVVPLFRQIGRCLNSLHFQVAERALFLWNNDHIRNLILQNCKAILPIILPALETNTQGHWNQAVQSLTLNVRKIFSDADQALFDECLMRFQEDEINERQKQEKRESIWKKLEDVAASKAVSNEPVLASRFMSSVAISTRS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1736 544 SUPERFAMILY ARM repeat 120 515 IPR016024 -
Lja6g1736 544 MobiDBLite consensus disorder prediction 62 89 - -
Lja6g1736 544 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A 59 KDA REGULATORY SUBUNIT B' ZETA ISOFORM 1 541 - -
Lja6g1736 544 MobiDBLite consensus disorder prediction 1 32 - -
Lja6g1736 544 PIRSF PP2A_B56 3 542 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lja6g1736 544 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 108 519 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lja6g1736 544 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 541 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lja6g1736 544 Gene3D - 115 518 IPR011989 -
Lja6g1736 544 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1736 Lja-Chr6 44538524 44544636 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1736 K11584 - gmx:100785874 800.816