Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1693 ATGGCTCAAAATCCAATTATTGTTGCTTTGGGTTTGGTATGTGCTTGGACTTGGATACAAAGCATAGATGGTGAGTACTTAATTGGTGTGGGAAGCTATGACATGACTGGTCCTGCTGCTGATGTGAACATGATGGGTTATGCCAACTTTGAACAGAACACTGCTGGGATTCATTTCCGGCTAAGAGCAAGAACTTTCATTGTGGCTGAGAGCCTTGGAGGTCCTAGGTTTGCCTTTGTTAATCTTGATGCTGGAATGGCATCACAGCTCCTAACTATTAAGGTGCTTGAAAGACTTAAATCAAGGTTTGGAAATTTGTACACTGAAGAAAACGTAGCAATCAGTGGGATTCATACACATGCTGGCCCTGGCGGGTATCTGCAGTACGTGCTTTACTCTGTGACTTCTCTTGGTTTTGTGAAGCAGTCCTTTGAAGCCATTGCTAACGCAATAGAACAAAGTATAATTCAAGCTCACAACAACCTCAAGCCTGGTTCCATTTTTATTAACACAGGAGATGTGAAGGAAGCAGGTATAAACAGGAGTCCAAGTGCATATCTTCTAAACCCTGCAGAGGAGAGAGCAAGATATCCCTCCAATGTTGACACTCAGATGACCCTTTTGAGGTTTGTGGATCATGCAAGTGGTAAAAGTGTTGGAGCATTCAACTGGCACGCAACACATGGAACCTCCATGAGCAGAGAAAACAAGCTTATCAGCGGAGACAACAAGGGTGTTGCTGCTAGACTCTTTGAAGATTTGTTTGCTTCTCAGACTAACTCTTCATCCTCAAACACCAATTCCACAGTACCAGATATTGGTCAACTCGTGAAGAAAGCACAATCAATTAAAGCCACAGGAGGAAAGGATTGCAATCAACATACAAGCCAAGCATCTAAAGTTAGAAAGAATGATGGATCCTTATTTGTTGGATCATTTTGCCAATCAAATGTAGGAGACGTGTCACCAAATGTTCTAGGAGCATTTTGCATTGACACTGGACACCCTTGTGACTTCAACCATTCTTCATGCAATGGCAATGACCAACTTTGTGTTGGCAGGGGACCCGGGTACCCAGATGAAATATTAAGCACAAAGATCATAGGAGAAAGGCAGTTCAAAACAGCTGTGGACCTGTTTGAGTCTGCTTCAGAGGAACTGACAGGGAACATTGACTATCGCCATGCTTATCTGAACTTCACAAACATTGAAGTTGAATTGGACACCAACAAGGTGGTTAAAACATGTCCTGCTGCCCTTGGTGCTGGTTTTGCAGCAGGAACAACAGATGGGCCAGGTGCTTTTGGGTTTCAACAAGGTGATACTGAGATTAATCCGTTTTTGAAAACGGTGAGGGATACGCTAAAAGAACCAAGTCAATATCAAGTGGGGTGCCAAAACCCAAAGGCAGTATTGTTAAGCACTGGAGAAATGTTTGATCCTTATCCTTGGGCGCCAGCAATTCTTCCAATCCAAATTCTGAGATTGGGAAAACTCATCATTCTTTCTGTACCAGGAGAGTTCACAACAATGTCGGGTAGAAGGCTCAGGGAGGCAGTGAAGAAGACATTAATATCTAGCAGTAATGGAGAATTCAATAATGAAACACATGTCGTTGTTGCAGGATTGACAAATACTTACTCACAATATATCGCAACTTTTGAAGAATACCAGCAGCAACGGTACGAGGCTGCTTCAACACTATATGGTCCTCACACATTATCAGCATACATCAAAGAATTTAAGAGACTCGCACAAGCAATGGCTGAAGGCGAGAAAATCATCGGAAAAGGTCCTTCGCCGCCAGATCTTTCATCAGTACAACTAAGCCTCTTACTTGATCCCTTTGGAGACTCAACCCCAGAAGGCATCAAATTTGGTGACATAAAGGAAGATATTGCATTTTCTAAACAAGGCTATTTTACAAAGGGAGATAGACCAAGTGCTACATTCTGGAGTGCCAACCCAAGATATGACCTTCTAACAGAAGGTACATTTGCAGCAGTCGAGAGCCTTCAAGGGGAAAGATGGATTTCTGTTCACGATGATGATGATTTAAGCTTGTTTTTCAAGTGGAAAGTAGATAATGTTTCCTCACATGGCTTAGCTACCATAGAATGGGAAATACCAAATGGTGCTGTTTCTGGAGTATACAGACTAAGACACTTTGGAGCATCAAAGAACACCATTGTCTCCCCAGTTAATTACTTTACTGGGTCTTCAAGTGCATTTGCAGTGCAATAA 2244 0.4247 MAQNPIIVALGLVCAWTWIQSIDGEYLIGVGSYDMTGPAADVNMMGYANFEQNTAGIHFRLRARTFIVAESLGGPRFAFVNLDAGMASQLLTIKVLERLKSRFGNLYTEENVAISGIHTHAGPGGYLQYVLYSVTSLGFVKQSFEAIANAIEQSIIQAHNNLKPGSIFINTGDVKEAGINRSPSAYLLNPAEERARYPSNVDTQMTLLRFVDHASGKSVGAFNWHATHGTSMSRENKLISGDNKGVAARLFEDLFASQTNSSSSNTNSTVPDIGQLVKKAQSIKATGGKDCNQHTSQASKVRKNDGSLFVGSFCQSNVGDVSPNVLGAFCIDTGHPCDFNHSSCNGNDQLCVGRGPGYPDEILSTKIIGERQFKTAVDLFESASEELTGNIDYRHAYLNFTNIEVELDTNKVVKTCPAALGAGFAAGTTDGPGAFGFQQGDTEINPFLKTVRDTLKEPSQYQVGCQNPKAVLLSTGEMFDPYPWAPAILPIQILRLGKLIILSVPGEFTTMSGRRLREAVKKTLISSSNGEFNNETHVVVAGLTNTYSQYIATFEEYQQQRYEAASTLYGPHTLSAYIKEFKRLAQAMAEGEKIIGKGPSPPDLSSVQLSLLLDPFGDSTPEGIKFGDIKEDIAFSKQGYFTKGDRPSATFWSANPRYDLLTEGTFAAVESLQGERWISVHDDDDLSLFFKWKVDNVSSHGLATIEWEIPNGAVSGVYRLRHFGASKNTIVSPVNYFTGSSSAFAVQ* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1693 747 PANTHER CERAMIDASE 12 747 IPR006823 GO:0017040|GO:0046514
Lja6g1693 747 PANTHER NEUTRAL CERAMIDASE 12 747 - -
Lja6g1693 747 Gene3D - 615 747 IPR038445 -
Lja6g1693 747 Pfam Neutral/alkaline non-lysosomal ceramidase, C-terminal 581 746 IPR031331 -
Lja6g1693 747 Pfam Neutral/alkaline non-lysosomal ceramidase, N-terminal 26 579 IPR031329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1693 Lja-Chr6 44020711 44025107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1693 K12349 - gmx:100793262 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1090 6 27667933 27668694 Lja6g1693 6 44020711 44025107 PCT