Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1452 ATGATCGAATGGACGAAGCGATTGAACGCTGCATTTGGGGCTTCATTTCTTTGGCTGATTTGCTTGGTTTACTTCACCCAGGGTTTTAGGTCCTTTGTCTGGACATCAATTTCCTACCAGCTTAAGGATAATCTTAAGTTGTCACCTTCAGCTTCCCAATTTGTGATTTCAGTAGCATTTTTTCCATGGAGCATCAAACCATTATATGGAATAATTTCTGATTGTATCCCAATCAAAGGAAGAAAACGGGTTCCCTACTTAGTGATTGCAACTGTGCTCTCCCTTGTGCCATGGTTGATTTTAGGCTTAAATTCAACATTGAGGGATTCAACAGGGCACCTAATGGTATTTTTGACTGTGCAAAACTTGGGCTCGGCCATGGCAGATGTTGTTGTTGACGCAATGATAGCGGAGGCAGTAAGAGATGACAAGGCTTCATATGCAGGCGACCTCCAATCAATATCTTGGTCTGCAATGGCTTTGGGAGGGATATGTGGGAGTTTGTCAGGGGGGTTTGCATTATCCAATTTACGGATGGATGCTATTTTTCTTCTATTTTCTGTGCTGCCTTGCATGCAGTTGTTATCATGCTGGTTTGTGGAGGAGAGCTCTGTAAATAGCAAAGTTTTACCAGAGGATTCTATTGATTCACATACGAATGATAGTAGTAGTATCCCAGATGAAGATAGTCCTTTAACCAAAAAGTCCCACAAGAGTACAAGAAGAAGAAAGAACGGCAAAAAGAACAAGAAAAATAAAGCAGTAAATACCAGCAAACCCAAAAAATTTGAGAAAGGAGATTCCATGGCATTAAAGTGGTTCCATTCTTTGAAAGATGCAATTTATGATTTGTGCCGTGCGTTTAAACAGCCAACGATTTGGAGACCTATGACTTGGTTTTTCCTTGCCCACATTACTCTTCCCGATCTTTCAACAGTCATTTTCTACTATGAAACCGAGGTTCTGAAGCTGGAAGCGTCTTTTCTCGGGACTGCCCGGGTTGTTGGGTGGTCAGGACTTATGCTGGGCACCTTTATTTATAATCGCCACCTGAAGTATATGACCCTAAGAAAAATTCTCATGTGTGCCCATATTGGGTTGGTCTTCTTGAATCTTCTGCAGATGGCTGTAGTGTCTAGGAAAAATATTGCCTTTGGAGTATCTGACAGGGTTATGGTGCTCTTTAGCTCGGCTCTTGCTTTTGGAGTCAATCAATTCAAGTTTATGCCTTTCCTGATCTTATCTGGACAACTATGTCCTCCTGGGATTGAAGGGACTTTATTTGCCCTTTTCATGTCAATAAACAATTTGGGGTCAACAGTGGGGTCTTTTGTGGGTGCTGGCTTGGCTTCTATATTGAACATTGATTCAGGATCATTTGACAATCTTCTATTGGGCATCACCATTCAAACCTTGTGCTATTGCATTCCAGTTGCTTTTCTGTTTCTGATACCAAAAGAAGCTACAGGTGTAGCAGCATAG 1482 0.4163 MIEWTKRLNAAFGASFLWLICLVYFTQGFRSFVWTSISYQLKDNLKLSPSASQFVISVAFFPWSIKPLYGIISDCIPIKGRKRVPYLVIATVLSLVPWLILGLNSTLRDSTGHLMVFLTVQNLGSAMADVVVDAMIAEAVRDDKASYAGDLQSISWSAMALGGICGSLSGGFALSNLRMDAIFLLFSVLPCMQLLSCWFVEESSVNSKVLPEDSIDSHTNDSSSIPDEDSPLTKKSHKSTRRRKNGKKNKKNKAVNTSKPKKFEKGDSMALKWFHSLKDAIYDLCRAFKQPTIWRPMTWFFLAHITLPDLSTVIFYYETEVLKLEASFLGTARVVGWSGLMLGTFIYNRHLKYMTLRKILMCAHIGLVFLNLLQMAVVSRKNIAFGVSDRVMVLFSSALAFGVNQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGSTVGSFVGAGLASILNIDSGSFDNLLLGITIQTLCYCIPVAFLFLIPKEATGVAA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1452 493 MobiDBLite consensus disorder prediction 211 227 - -
Lja6g1452 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 4-RELATED 1 492 - -
Lja6g1452 493 MobiDBLite consensus disorder prediction 236 256 - -
Lja6g1452 493 Gene3D MFS general substrate transporter like domains 14 483 IPR036259 -
Lja6g1452 493 MobiDBLite consensus disorder prediction 211 261 - -
Lja6g1452 493 SUPERFAMILY MFS general substrate transporter 14 487 IPR036259 -
Lja6g1452 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 1 492 IPR039309 -
Lja6g1452 493 TIGRFAM fbt: folate/biopterin transporter 17 486 IPR004324 GO:0016021
Lja6g1452 493 CDD MFS_FBT 18 482 - -
Lja6g1452 493 Pfam BT1 family 27 487 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1452 Lja-Chr6 40252451 40256468 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1452 - - gmx:100781251 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1452 6 40252451 40256468 Lja6g1452 6 40252451 40256468 ECH