Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1442 ATGGTTTCACCAGCTGGTGACAGTGACCCATCTCTCAGAACAGCCCATTTTCTGAAACCCATTGCTAATGGTAATGGAACAGTTTCTGAGTCTGAGACTCCATTTTTCTCTGGGCACCCCATTTTTGAACAGTGGCCTCTGAAAGTCCATTTCAATGGGTGGCGCAACTTGCATCCGAGATGGGTTAGGTGGGTGAATGCACTTCGTCTCAGGTATGAATCTGTGTGGAAGAAAGCTGGAATGTTTGATGCTATCATGAGCACAACGTGCTACATTATGAGAAACCGTGATTTGGCTTTTGGGGTTGCAGAGAAATGGTGTTCTGAGACAAATACCTTTGTGTTTTCATGGGGTGAGGCCACTATCACGTTGGAGGATGTCATGGTTTTGGGGGGTTACCCTGTTGTTGGTGACCCTGTTTTCACCTCACTTGAGAGCCCAGAAATGAGAGAGGTTGAGCAAAAATTGGTCCGTGCAGCGCAAGAACATTGGCGGAGTAAAGGCCTTAACCCTTACACATCAAAATGGATAGATTTTTTCATGAATGGTGGGAGTGAAATTGAGCATGAAGCTTTCCTTGCTGCTTGGTTGTCAGTGTTTGTTTTTCCTCGTAACAACTTGGTAAATAAGTTGTTGTTTCCTATGGCTGTTCTTCTTGCTAGAGGTAATCCCATTGCTTTGGCACCAGCTGTTTTGGCTAGCATATATAAGGATTTGGGTGTGTTGAAACAAACAATAGCTGATTTGACAAAAGAATTAGTAGTTGGTTATGAATTGGGGTTTGAGTTAGAGGTTAATCTTTGGTCACCCTTTAACTTGGTTCAAGTTTGGGTGTGGGAAAGGTTTAAGAATTTGCAGCCAGAGCCTAATTTAACTAATGATGGAGACCCTTTATTGTTTAAGTGGAGCAAGGTTAGGGCCTTGGAAATTGATAATGTTAGGCTGGCACTGGACTTAGCTATAGATGATTTTGTTTGGCGTCCATATGTTAGATATGGTGGTAAGTTCAGGGTGTTTTATCCCGAAAATGAAATTCAGCAGGTACCATTTGAGGCTGATTTGAGCAAAGAGCTAGCCTCATTTGTTACTTGCATGAGAGTTTCTCAGCTTGTTGGATTTGACTCAACTATAATGCAGTACTTCCCGCATAGAGTTGCTATGCAATTCGGAATGGATCAAGATGTTCCGGGTCGTGTGCCTGTATTCAATGGAACTAGAGCTACTGCTTGGGAAAATTACTGCAGGCCCATTTCTGATAGGAATTTGTATTTTCCGTCAAGGCTTTTTGAGGCAGATGTTACCACACGTTATGCAAGGTGGTGGAAGCAATCAGTATTGCATCATCAGGATTTTGCTAAGAATATTGTGCGGAGGAAGAGAAGTGCAAGGGCATCAAAACGTGGACCGCATGTAGTTAAAGCAAACATAAATGGTAATGATGCTATTGCTGATGCTCCACCCTTGTCTCCTCCCAAACTTGTTAGCACTGTTATTCTCAGAAAATCTTGTGATGATGGTTTGAAAACTGTCAAGGTTGAAAATGATGCTGATGTACCTTCTCGTTTTCTTCCTAAACAATTGCATATAGTTCCTTTTGGAAATTCTGTTCAAGATGGTTTGATAGCTAATGAAGATACTGGTGTTGATGTTCCAACCAATTTTCCCCCAAAGCTTGATGCACTGAATCCTATGACGAAGTCAAATGCAAAAGATAACACTGAACCTTCATTAGGGAGTTTGAAGGAAGATCTTGAAGATGCAAATGGGATTAAAGGATCAAGGCTGTCTAGTGACAAAGTTAGGCTATTTGAGATCCCAGTTGAAAGCTGTAGCTGTAGCTGTGTAAAAGCACTGGACAAGAGACTTAGCAGACTTGAGAGAGAGATTTCAAGATTAAAGAAAGCAAGGTTTGGCAATATTTGA 1923 0.4176 MVSPAGDSDPSLRTAHFLKPIANGNGTVSESETPFFSGHPIFEQWPLKVHFNGWRNLHPRWVRWVNALRLRYESVWKKAGMFDAIMSTTCYIMRNRDLAFGVAEKWCSETNTFVFSWGEATITLEDVMVLGGYPVVGDPVFTSLESPEMREVEQKLVRAAQEHWRSKGLNPYTSKWIDFFMNGGSEIEHEAFLAAWLSVFVFPRNNLVNKLLFPMAVLLARGNPIALAPAVLASIYKDLGVLKQTIADLTKELVVGYELGFELEVNLWSPFNLVQVWVWERFKNLQPEPNLTNDGDPLLFKWSKVRALEIDNVRLALDLAIDDFVWRPYVRYGGKFRVFYPENEIQQVPFEADLSKELASFVTCMRVSQLVGFDSTIMQYFPHRVAMQFGMDQDVPGRVPVFNGTRATAWENYCRPISDRNLYFPSRLFEADVTTRYARWWKQSVLHHQDFAKNIVRRKRSARASKRGPHVVKANINGNDAIADAPPLSPPKLVSTVILRKSCDDGLKTVKVENDADVPSRFLPKQLHIVPFGNSVQDGLIANEDTGVDVPTNFPPKLDALNPMTKSNAKDNTEPSLGSLKEDLEDANGIKGSRLSSDKVRLFEIPVESCSCSCVKALDKRLSRLEREISRLKKARFGNI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1442 640 Coils Coil 615 635 - -
Lja6g1442 640 PANTHER PROTEIN MAIN-LIKE 2 1 493 IPR044824 GO:0010073|GO:0048507
Lja6g1442 640 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG 1 493 - -
Lja6g1442 640 MobiDBLite consensus disorder prediction 559 584 - -
Lja6g1442 640 Pfam Plant mobile domain 80 442 IPR019557 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1442 Lja-Chr6 40156329 40158251 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1442 - - lja:Lj6g3v0657730.1 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1442 6 40156329 40158251 Lja6g1442 6 40156329 40158251 ECH