Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1401 ATGGCGTTGTGGTCTGCTGCAAAGAGCTTCCATGTCCCAGCAAACGTCGGCGTTCTGCGCCGCGGCGCTTCATGGGCTGCCGGAATTGCCGGAGTCTCGGTGGCCGGCACCGCCATGTGGCGTTCCTCTTCGTCTAAGCGCTCTTCACCGTTCGCTTGCTTGAGCCTTTCCACTGATACCCGGACCAAGGAAGCTGTTCAGACTGAAAAGGCCCCTGCTGCTTTGGGGCCATATTCTCAAGCAATCAAGGCCAACAACCTTCTGTTTGTGTCCGGTGTTCTTGGTCTTGATCCTGAGACAGGAAAATTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGATTCTCAAAAATATGGGGGAGATCCTAAAATCTGGGGGAGCGAGCTACACATCAGTTGTTAAGACAACAATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGAGATCTATGCTAAATACTTCACTTCACCTGCCCCGGCTCGTTCAACATATCAAGTAGCTGCTTTGCCATTGGACGCCAAGATTGAAATTGAGTGCATAGCAGCACTGTGA 561 0.4991 MALWSAAKSFHVPANVGVLRRGASWAAGIAGVSVAGTAMWRSSSSKRSSPFACLSLSTDTRTKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLDAKIEIECIAAL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1401 186 PANTHER BNAA05G36080D PROTEIN 4 186 - -
Lja6g1401 186 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 4 186 IPR006175 -
Lja6g1401 186 Pfam Endoribonuclease L-PSP 69 185 IPR006175 -
Lja6g1401 186 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 63 185 IPR006056 -
Lja6g1401 186 SUPERFAMILY YjgF-like 63 186 IPR035959 -
Lja6g1401 186 Gene3D - 58 185 IPR035959 -
Lja6g1401 186 ProSitePatterns Uncharacterized protein family UPF0076 signature. 162 180 IPR019897 -
Lja6g1401 186 CDD YjgF_YER057c_UK114_family 78 184 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1401 K09022 - gmx:100792467 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1401 6 39396292 39400832 Lja6g1401 6 39396292 39400832 ECH