Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1394 ATGGTGAAGGGGCTGCACAGCCAGAACCTCCCCGCCGATGTGGCGCAGGTCGTCGATCAGCTCGAGCGCCACTGCTTGGCTCCCGATGGATCTCTCATGTCCAAACCTCTCTACAACGATCTCCAACTCGCCAGAGAGGAAATGTGCAGGGAAAGATTGCGTTACCTGGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCAGCAAGCCATTTCCATGTCTAGCCTTGGTGGAATTAGAGATACCGGCGGTCTTTATCCACAGCTTGGGTTGAGGAACTCTCCTCAGGTTTACCAAACTTTAGAGCATCAAATGGTTGTGGCTGAGGCAGCTCAACGATTGAGACTACCCCTTATTTCTAAAGATGGAGAAGTTCATGATGAAGATATTGAAAAACTGAGTGTAGTGTCTCGAAGCTCCCTTGACAGCACTAGCACCAGTGCTATGATCAACTCAAGCATGAATTCTTCTAATTATACCACTCCAAATAGCTCTGTTAGTGGGGCTAATTCATCTCTTGCTGCTATGGATCCAGTGGAACCTGGAGTGGGTGGAGTTCCCAGTCGTTTTCTTGGAATTACACCTTCTTATTTGTGGCAAACTCAGCATCAACAAACACCATTATCTGTGGATATGACAGAGTATCGGATGTCTCTCTCGCGTGAGGTAGAGGCCCGCTTGAAAATGAAATGTGATATGTTATTAGAAGCCTTTATATTGGATGACAGCGACTCTTCATCTGGAAGTCAAAGTTCAAGTTCTCGGCTTCCGGAAAGGGTGAAGTTGTTGATTGAGGAGATTGAAAGAGAAGAAGCAGCACTGCGGGATGACCTTTATTCTGCTGATAGGAAATTTGCTGAATATTATAATGTCTTGGAGCAGATACTAGGGGTGCTCATTAAACTTGTCAAAGATTTGAAGTTGGAGCATCAACATAAATATGATGAGCTGCAGAAGACATGGCTCTGTAAACGATGTGCGACCATGAGTGCAAAATTGAGGGTTCTACAACATGTTCTCCTGCTTGAAACTTACACAAAGGACTCTATACCTGCCCTTCATAAGATAAGGAAGTATCTCGTTGAGGCTACTGAAGAAGCTTCTATTGCATACAATAAAGCGGTTACTCGCCTGCGTGAGTACCAGGGTGTTGATCCTCACTTCGACAACATTGCAAGGCAGTACCATGACATTGTAAAGAAATTGGAGAACATGCAGTGGACAATCCACCAAGTTGAAATGGACCTGAAACGCTTGCCAGATAACCCCAGCACATAG 1293 0.4517 MVKGLHSQNLPADVAQVVDQLERHCLAPDGSLMSKPLYNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYQQAISMSSLGGIRDTGGLYPQLGLRNSPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEDIEKLSVVSRSSLDSTSTSAMINSSMNSSNYTTPNSSVSGANSSLAAMDPVEPGVGGVPSRFLGITPSYLWQTQHQQTPLSVDMTEYRMSLSREVEARLKMKCDMLLEAFILDDSDSSSGSQSSSSRLPERVKLLIEEIEREEAALRDDLYSADRKFAEYYNVLEQILGVLIKLVKDLKLEHQHKYDELQKTWLCKRCATMSAKLRVLQHVLLLETYTKDSIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDNIARQYHDIVKKLENMQWTIHQVEMDLKRLPDNPST* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1394 430 Coils Coil 269 289 - -
Lja6g1394 430 Pfam HAUS augmin-like complex subunit 4 184 419 IPR029327 GO:0051225|GO:0070652
Lja6g1394 430 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 2 422 IPR029327 GO:0051225|GO:0070652
Lja6g1394 430 PANTHER BNAA06G02620D PROTEIN 2 422 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1394 K16587 - gmx:100790889 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1394 6 39308959 39315748 Lja6g1394 6 39308959 39315748 ECH