Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1384 ATGGGGAATTCCTTTCATTCTTTGTTTCTCTGTTTCTTCATCTTCTTCTTCAGCTTCGGATTCTCCTCCTCAGAGGCTCAAAAAAAGGCCCCGGCTGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGAGTCTTTCCCTTGCAAAGGCAATTCTTCCTTACTATGGAATTGATTTTCCAACTAAGAAACCCACTGGCAGGTTCAGCAATGGAAAGAATGCTGCAGATTTAATTGCTGAAAAAGTGGGCCTTCCCACATCACCAGCTTACCTGTCCCTAGTGTTAAAGGCCAACCACCACAAGAACGTATCCTACTTGGAAGGGGTTAACTTTGCCTCTGGAGGTGCTGGAATTTTTGACGGCACAGATGATACTTCTAAGCAATCAATACCGTTGACAAAGCAAGTGGACTTCTATTCAAAAGTGCATGAACAATTGACACAACAGATAGGAGCATCTACTCTTCAGAAACGCCTCTCAAAATCCATCTTCCTTGTTGTGATTGGTAGCAACGATATCTTTGGTTATTTTGGCTCAAATGTAACTCAAAACAAAAGCACTCCACAACAGTTTGCGGATTCCATGGCTTCCTCACTAAAAGTGCACCTACAGAGATTATACAACAACGGTGCAAGGAAATTTGAGATTGTTGGTGTAGCTGCACTTGGATGCTGCCCCGCATACAGGGCCAAGAACAAGAAAACAGAATGCTTTTCAGAAGCCAATTTGTTAGCGGCTAAATATGATGAAGTCCTTCAATCCATGTTAAAGGAATGGCAATCAGAGAAGAAGGACTTGAGTTACTCCTACTTCGATACCTATGCTGCCCTCCAAGATCTCATCCAGAGTCCATCTTCTTACGGATTTGCAAATGTGAAAGGTGCTTGTTGTGGACTTGGTGAGCTGAATGCCCAGATTCCATGCCTTCCAATTTCAAATATTTGTTCGAACAGAAAAGACCATGTCTTCTGGGATGCAGTCCATCCTTCCGAGGCAGCCATTCGCATTGTTGTGGATAGACTTTTTAGTGGACATCCAAAATACACATCTCCTATCAACATGGAACAGCTCCTAGCTATTTGA 1101 0.4269 MGNSFHSLFLCFFIFFFSFGFSSSEAQKKAPAVYVFGDSLVDVGNNNYLSLSLAKAILPYYGIDFPTKKPTGRFSNGKNAADLIAEKVGLPTSPAYLSLVLKANHHKNVSYLEGVNFASGGAGIFDGTDDTSKQSIPLTKQVDFYSKVHEQLTQQIGASTLQKRLSKSIFLVVIGSNDIFGYFGSNVTQNKSTPQQFADSMASSLKVHLQRLYNNGARKFEIVGVAALGCCPAYRAKNKKTECFSEANLLAAKYDEVLQSMLKEWQSEKKDLSYSYFDTYAALQDLIQSPSSYGFANVKGACCGLGELNAQIPCLPISNICSNRKDHVFWDAVHPSEAAIRIVVDRLFSGHPKYTSPINMEQLLAI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1384 366 CDD SGNH_plant_lipase_like 31 350 IPR035669 -
Lja6g1384 366 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Lja6g1384 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 364 - -
Lja6g1384 366 SUPERFAMILY SGNH hydrolase 30 348 - -
Lja6g1384 366 Gene3D SGNH hydrolase 18 352 IPR036514 -
Lja6g1384 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1384 Lja-Chr6 39178141 39182618 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1384 30 364 Acyl Lipid Metabolism Gene Families AT4G10950 33.235 1.62e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1384 - - gmx:100790145 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1384 6 39178141 39182618 Lja6g1384 6 39178141 39182618 ECH
Lja6g1384 6 39178141 39182618 Lja6g1384 6 39178141 39182618 PCT