Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1379 ATGGAGGCTCACGCTACTTCATTGGTATCCAAAGCCAGAACCGCATTCCATTCCGCAGCTGCAAAAGCGGAGCGGGTTCTCATGGACTTCAAATCCGATTTAGATTCTGACAAGCAATCACGCCACCAGTCAGGGAGGCTGCAGGGAGATGACTCTGCTCAGAAGAATGAGATGGAGTCAAAGCTTTTCAATGATCTGAAGCATATAAAGTGGAGACCACTACATATAGGAAAGAAGCAGGATTGGCAAGATAGAATTAAAAACTTTCGGAAAGGGAGAAAAGAAATCGAAGATACAGATAAAGTTGGAGATGCAAACATTACTGCTGATGCATTATATGATGAAGATTGGTCCATCGTCAATGTGAGAAATGATCTTAATGCCAAGGCGTCAGAAGCTATTCTTCCAGAATTGAGACGGTCAGGGCTGGCCGGAACAGAAGCAATTCCATCGGTTGAAGGCTTAACTGTGGCGACTGAAGACCCTATTCCTCCATCATCTGTCCTGAAGCAATTGGCTTTAGCTGTTGAGGCTGGACGGAAAACACATTCAATGAAGGATTTTGTAGCTTCATCCGGAGGTTCTTCCCCTGCCTTAGAGAGGGAAGGCTTAAGTCTCTCTGCAATAAAGGCTTTAGTGTTACGTGAAAAGGAGGAAAAACTCTCCTCTGAGTTTTGTAGCAATGAGAAAGTTGTGTATTTGATTAATTCTCTGTTTAATCCAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCTGACCCAGAAGAAATTGCTTTAACATCTTTGCCAAGAGATATTCACAGTGCTCCTCCTGAAAGCCTAGTTGTTAAACTGGCTGAAGTAATTGGAAACTTCAAGACTGTTCGAAAAATGGCTCTTTTTTGGTGCAGTGTTGTTACTGAACTGAGAAAACTTTGGTCTGAAGACAAACATTTACCTGGAGTCCCCCCAGATGATGTTCCAGATCTGAAGTCATGCCTTCTGTATCAACAGTTTCAAGTAATTAATTGCTGCATCTCTCGGAAAAGGCGCCATATTATTGCCACCGAAGCCGTAGACTCTATGGTGATGGAAGCCAATTCAAATACATTAAAATCAGGAAACCACAGTGACAGAACTTCTGCTACTCCTGTATTATATGCTAGGATCAGTACTGGAGAGCTTGTTCTTCGACTTGGTGCTCTTTGCCCATCTGGAGATCTAACATTATTGGAAACCGGCGAGCCTATGTACACTCCTATCACGCAGGAGGGAGCCTTGCTTACAGAAGATTTGATCAAAGAGACAGAGGAGTTTGTGCTTCGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAGCTTCTCTCTGATATGCAAGCTTTCAAGGCTGCAAATCCAGGTTGTATTTTGGAAGATTTTGTGAGATGGTACTCTCCTCCTGATTGGACTGAAAATGAGGCAAGTACTGAGGAAACTGAGTGTTCTGATGGTGGTGAGTCATTGCCTACCAAAGGTCAGCTAAGTCAGCGAATGCAGAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCTAAACCAGTACCAGCTGCAAAACAAACACCTCTCTTTGATGAGGATTTGGTGGTGAAGGGCATCCTTGATGCACTTGAGGAAATCCAGCCTTCTGAACTCTTTGGACAGCTCTTTGTTTCTCTTCTTGGTTTAGGATTTATAATTGCCGAACCTGTGCTGTCTGGTAATGTTGACTTCTCCAAGATGTTTAATGACTACAAGGAGTATGTAGCAGCCACTTGTCAAAGCAGCAGATTCAATGAGGAAGTTGATGAACTTGTTAAGGTATATGAAATGGTGGAGACAATGTTGCTGAATCCTAAGGAGGCACTGAAGATGATGAAGCAAACAGAAGAATCAACTGTGACTACTGGTGAGCCGACACGCAGGTTCAAGAAGCTTAGTCAAATCTTTGGTGGCAAAGATAAACTGCTGACAAGGCCTGTCTCGCAAGATGTAAACAAAGAAGAAAAATGCATTCGACAATCTTTTTCAAGTTTCTTTGAGAGGAACTCATCTTTGCTTTCAAAGAAGTGTCCCAAACCTGGATACCAGTCCCCTGTTGAGACACTTCCCTCTCCAGAAAGCGATTGGACGTTTGTTTAA 2136 0.4335 MEAHATSLVSKARTAFHSAAAKAERVLMDFKSDLDSDKQSRHQSGRLQGDDSAQKNEMESKLFNDLKHIKWRPLHIGKKQDWQDRIKNFRKGRKEIEDTDKVGDANITADALYDEDWSIVNVRNDLNAKASEAILPELRRSGLAGTEAIPSVEGLTVATEDPIPPSSVLKQLALAVEAGRKTHSMKDFVASSGGSSPALEREGLSLSAIKALVLREKEEKLSSEFCSNEKVVYLINSLFNPEGEFLRRKINSDPEEIALTSLPRDIHSAPPESLVVKLAEVIGNFKTVRKMALFWCSVVTELRKLWSEDKHLPGVPPDDVPDLKSCLLYQQFQVINCCISRKRRHIIATEAVDSMVMEANSNTLKSGNHSDRTSATPVLYARISTGELVLRLGALCPSGDLTLLETGEPMYTPITQEGALLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTENEASTEETECSDGGESLPTKGQLSQRMQKEGNLWRELWETSKPVPAAKQTPLFDEDLVVKGILDALEEIQPSELFGQLFVSLLGLGFIIAEPVLSGNVDFSKMFNDYKEYVAATCQSSRFNEEVDELVKVYEMVETMLLNPKEALKMMKQTEESTVTTGEPTRRFKKLSQIFGGKDKLLTRPVSQDVNKEEKCIRQSFSSFFERNSSLLSKKCPKPGYQSPVETLPSPESDWTFV* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1379 711 MobiDBLite consensus disorder prediction 474 501 - -
Lja6g1379 711 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 710 IPR045700 GO:0005096|GO:0043547
Lja6g1379 711 MobiDBLite consensus disorder prediction 689 711 - -
Lja6g1379 711 MobiDBLite consensus disorder prediction 34 55 - -
Lja6g1379 711 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 5 710 - -
Lja6g1379 711 MobiDBLite consensus disorder prediction 486 501 - -
Lja6g1379 711 Pfam Rab3 GTPase-activating protein catalytic subunit 390 543 IPR026147 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1379 K18270 - gmx:100800515 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1379 6 39107290 39114400 Lja6g1379 6 39107290 39114400 ECH
Lja6g1379 6 39107290 39114400 Lja6g1379 6 39107290 39114400 PCT