Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1364 ATGGGGTTCCTTAAAGCGATATTCGTCATAACAATAACCATGGCTTTGTCCATTGCAGCACTCGTCACAATGAAAAACATCACCACAACCAAAGAGGAATCAGCAAAACCATTCCTACCTTCAGACTCACAACCACTAATGGCTCATGAGAAGAACACACTCCTTCCTTCAAAGAGGGTGAGTCGGTTCCTCGCTCAAAAGCCAGCCTATCCTTACCCTTATCCTGATGCTTCCAATTATCCGGTCGTCCATTGCCAGAAGGACAACGAGATTTGCACCTCATTGAGCAACAGCTATTACAACTCCACTTGCTGCAACAACAAGTGCATGGATGTGAGCTATGACAAGCATAATTGTGGTGCGTGCAAGAAGAAGTGCAAGTACACCACCACATGTTGTAGAGGCCAATGTGTTGACATCAACTTTGACAAGAGGCATTGTGGCGGTTGCAACAACCGCTGCGAAACTGGTCAGTACTGTACCTATGGAATGTGCGGTTACGCTTGA 507 0.4615 MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRVSRFLAQKPAYPYPYPDASNYPVVHCQKDNEICTSLSNSYYNSTCCNNKCMDVSYDKHNCGACKKKCKYTTTCCRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1364 168 Pfam Stigma-specific protein, Stig1 21 168 IPR006969 -
Lja6g1364 168 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 1 1 168 - -
Lja6g1364 168 PANTHER - 1 168 IPR006969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1364 Lja-Chr6 38822802 38823308 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1364 - - lja:Lj6g3v0855550.1 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1364 6 38822802 38823308 Lja6g1364 6 38822802 38823308 ECH