Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1339 ATGGCACCCTCTATTTTCTTCGTTCTGCTATCCCTTCTGTTGATTCCAGCAAGTGGTTATGTCCAACTCTATGAAGATGGTTTCATCTCTGGGGTCATATCTGATAAGGGTCTCGATTTTGCGAAGGATTTGCTGATAGAGAAAGGTATTGCCTCTCTTGTTCTGCTTCAGCTGCCAGAGATTGAAAACTCTGCCAAAGTCCCACTTGTTGGAAATGCTAAAGTGGTTCTTTCTGATATCACAATCAAGGATATTCAAATCAATTCTTCATCTGTTAAGACTGGAGAGAGTGGCATCGTTCTAGTCATTTCAGGTGCCACTGCAGATTTGAGTATGAAGTGGAGGTATTCTTGCAGCAGTTGGTTGATCCCAATTGGGATTTCAGATAGTGGAACTGCTTCAGTGAAGGTTAAAGGCATGCAAGTAGGGCTTACAGTAAATTTAAAGAACCAAGAAGGAACTCTTAAGTTGAGTCTCTTAGATTATGGATGTTATGTGGGAGATTTATCTATAAAGTTGGATGGCGGAACAGCTTGGCTTTACCAATTGCTAGTAGATGCTTTTGGAGGGAATATTGCATCTTCAGTAGAAGAGGCTGTTTCGGAGAAAATCAAAGAAGGGATAGCAAAGCTTGACAAGTTTTTGCAGTCTCTTCCAAAGCAAATCCCACTAGACAAAACTTCTGCACTAAATGTTTCTTTTGTCGGCAATCCTGTGTTGAGTAATTCCTCTATAGCTATTGCAATTAATGGTTTATTCACAGAGAGAAGTGAAGTTGTAGAATCTGAAGGTTATAAGAAAGGATTTAAGATTTCCTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTTCACTACATGAATATGTGATTCAATCTGCTAGCCTGGTTTATTTCAATGCTGGTAAAATGCAATTGATTATCGATGAACTACCTGATCAGGACATTTTGAACACTGCTGAATGGAGATTCATAGTTCCTCAATTATACAAACAATATCCAAATGATAACATGCAGCTTGATATCTCTGTCTCTTCTCCACCAGTCATACAAGTGACCTACCAAGATATTGGTGCTACTATTTCTATAGATATAACAATTGATGTTCTCAAAGGCGGTGAAGTCATACCTGTTGCATGCATCTCAGTGGATATTAGTGCTTCATGTGCTGCGGAAATTGTAGGAAACAATATTGCTGGTAGGCTCAGATTACAAAATTTGTCTACATACTTGAAATGGAGCAAAATTGGGAAATTGCGCGTGCATCTTATTCAGTCACTGATGTCAAGTGTCCTCAAAACAGTTATCATACCATACCTGAACTTCCAACTAAAGAGAGGAGTCATGTTGCCATATATTGATGGATTTGGGTTTCAGAATACTACTATCTTGTACACACCTCCATGGATTGCACTGTGTAGTGATGTTTCCTTCATAGGAGACTACTATCTTAATCAACAGTCACCTTTTGTATCATAA 1479 0.3888 MAPSIFFVLLSLLLIPASGYVQLYEDGFISGVISDKGLDFAKDLLIEKGIASLVLLQLPEIENSAKVPLVGNAKVVLSDITIKDIQINSSSVKTGESGIVLVISGATADLSMKWRYSCSSWLIPIGISDSGTASVKVKGMQVGLTVNLKNQEGTLKLSLLDYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKIKEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPKMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQDILNTAEWRFIVPQLYKQYPNDNMQLDISVSSPPVIQVTYQDIGATISIDITIDVLKGGEVIPVACISVDISASCAAEIVGNNIAGRLRLQNLSTYLKWSKIGKLRVHLIQSLMSSVLKTVIIPYLNFQLKRGVMLPYIDGFGFQNTTILYTPPWIALCSDVSFIGDYYLNQQSPFVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1339 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Lja6g1339 492 Pfam LBP / BPI / CETP family, C-terminal domain 280 463 IPR001124 GO:0008289
Lja6g1339 492 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 492 - -
Lja6g1339 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 247 478 IPR017943 GO:0008289
Lja6g1339 492 Gene3D - 36 216 - -
Lja6g1339 492 Gene3D - 32 463 - -
Lja6g1339 492 SMART bpi2_2 276 474 IPR001124 GO:0008289
Lja6g1339 492 SMART bpi1_3 33 258 IPR017942 GO:0008289
Lja6g1339 492 PANTHER OS06G0309200 PROTEIN 1 492 IPR045897 -
Lja6g1339 492 PIRSF Lipid_binding_protein 4 482 IPR030675 GO:0005615|GO:0008289
Lja6g1339 492 CDD BPI1 33 254 - -
Lja6g1339 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 209 IPR017942 GO:0008289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1339 K05399 - gmx:100815362 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1339 6 38434849 38439441 Lja6g1339 6 38434849 38439441 ECH
Lja6g1339 6 38434849 38439441 Lja6g1339 6 38434849 38439441 PCT