Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1336 ATGGCAATGCTTCCCCTCACAAACCCTAATGAGCTTCTCTCATCCTCCTCCATTCCCACTCCAATTCGCCACAATGCATTGTCATCCTCCTCCTTTTCCCTCAGAAAATGCGTTTCTCTAAATCCTACAACAAGAAGAATCAGCACCCCAGACCCCCTACGACGTCGTTTTGGGCCAGTTACCTGCACCTTCGCGCCCATTGACAACGCCAAGATTAAGGTTGTCGGTGTTGGTGGCGGCGGCAACAATGCCGTTAACCGCATGATTGGTTGCGGATTACAAGGTGTAGATTTTTATGCTATAAATACTGATGCTCAAGCACTGTTGCATTCTGCTGCTGAGAATCCTATCAAAATTGGAGAACTTCTGACCCGTGGTTTAGGTACTGGTGGGAATCCACTTTTGGGGGAACAAGCTGCTGAGGAATCAAAAGAAGCTATTGCTAATGCTCTTAAAGGCTCAGATTTGGTGTTTGTAACTGCTGGCATGGGCGGGGGTACAGGGTCTGGTGCTGCGCCAGTCGTGGCTCAAATATCAAAGGAGGCAGGTTACTTGACTGTAGGTGTTGTTACATATCCCTTCAGCTTTGAAGGACGCAAAAGATCGTTACAGGCACTTGAAGCCATTGAAAAGCTGCAGAAAAATGTGGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGACTGCGCTGCAGGACGCTTTCCATCTTGCAGATGATGTTCTACGGCAGGGAGTACAGGGGATATCAGACATCATAACAATACCTGGCCTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGATTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCCAGTAAAAACCGTGCAGAAGAAGCTGCTGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAGTCAGCTACTGGGATAGTATATAATATTACTGGAGGAAAAGACATAACTCTTCAGGAAGTGAATAGAGTGTCTCAGGTCGTGACAAGTTTAGCCGATCCTTCTGCCAATATTATATTTGGGGCTGTTGTTGATGATCGCTACAATGGGGAGATTCATGTGACCATGATTGCAACTGGCTTCTCACAGTCCTTCCAGAAGACACTACTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAGATTACCAGGGGGCCAAGAAAGCAAGGCAACTTCCCCTCCCCTCAATGCCTCAAATATTCCATCAACTGTTGCATCTAGAGCATCCCCACGAAAGCTCTTCTTTTAA 1284 0.4611 MAMLPLTNPNELLSSSSIPTPIRHNALSSSSFSLRKCVSLNPTTRRISTPDPLRRRFGPVTCTFAPIDNAKIKVVGVGGGGNNAVNRMIGCGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFVTAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTALQDAFHLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTMIATGFSQSFQKTLLTDPRAAKLLDRLPGGQESKATSPPLNASNIPSTVASRASPRKLFF* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1336 427 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 164 170 IPR017975 GO:0005525|GO:0005874|GO:0007017
Lja6g1336 427 TIGRFAM ftsZ: cell division protein FtsZ 66 380 IPR000158 GO:0003924|GO:0005525
Lja6g1336 427 Pfam FtsZ family, C-terminal domain 280 373 IPR024757 -
Lja6g1336 427 Pfam Tubulin/FtsZ family, GTPase domain 71 231 IPR003008 GO:0005525
Lja6g1336 427 CDD FtsZ_type1 87 372 IPR000158 GO:0003924|GO:0005525
Lja6g1336 427 SUPERFAMILY Tubulin nucleotide-binding domain-like 70 266 IPR036525 -
Lja6g1336 427 SMART Tubulin_C_4 265 382 IPR018316 -
Lja6g1336 427 Gene3D - 279 384 IPR037103 -
Lja6g1336 427 PRINTS Cell division protein FtsZ signature 156 176 IPR003008 GO:0005525
Lja6g1336 427 PRINTS Cell division protein FtsZ signature 184 205 IPR003008 GO:0005525
Lja6g1336 427 PRINTS Cell division protein FtsZ signature 247 269 IPR003008 GO:0005525
Lja6g1336 427 PRINTS Cell division protein FtsZ signature 270 291 IPR003008 GO:0005525
Lja6g1336 427 SUPERFAMILY Tubulin C-terminal domain-like 265 380 IPR008280 -
Lja6g1336 427 Gene3D Tubulin/FtsZ, GTPase domain 65 278 IPR036525 -
Lja6g1336 427 SMART Tubulin_4 71 263 IPR003008 GO:0005525
Lja6g1336 427 ProSitePatterns FtsZ protein signature 2. 155 176 IPR020805 GO:0005525
Lja6g1336 427 Hamap Cell division protein FtsZ [ftsZ]. 67 397 IPR000158 GO:0003924|GO:0005525
Lja6g1336 427 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 5 427 IPR045061 GO:0003924|GO:0005525
Lja6g1336 427 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 5 427 - -
Lja6g1336 427 ProSitePatterns FtsZ protein signature 1. 102 136 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1336 Lja-Chr6 38414361 38417089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1336 K03531 - gmx:100809043 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1336 6 38414361 38417089 Lja6g1336 6 38414361 38417089 ECH