Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1307 ATGAAGCAAAAGAGCAACAACGCAACGAGTGGTTTCTTAGGAAGCATCTCTTCCTCTTCCATCAGAAACCTTCTTCCCAGATCTTCAACACGCAGACCCACTTCTTCAAACCCCAAATCCGACGCCGAAAACACTCCCCCAACCCACCCAAACATTCCCCTCAATCATCCCAGCAAAGCATTTTCTCACAACAACCCTCATGTGAAGGTTGTGGTGAGAATTAGACCTGAAAGTAGCAATGGAAAAGAAGGAGATTGGAAAGTTAAGAAGGTTTCTTCAGATGCCTTGTGTGTTGGGGATAGGATGTACACATTTGATGAAGTTTTTGATACCAACTCCAATCAGAAAGATGTTTTTCAGTCAATTGGTGTTCCCTTGGTTAGAGATGCTTTAGCTGGTTACAACACTACAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCGAGTGCCATGGTTGAGGAGCCCTCGTGTCAAAGTCACCAGGGGATAGTTCCTCGGATCTTCCGAATGTTGTTTTCTGAGCTTGAGAGAGAGAGACTTATGTCTGATCAGAAACAGTTCATCTATCAATGCCGTTGTTCTTTTCTTGAGATATATGATGAAAGAATTGGGAATTTACTGAATCCAACCCAACATAACCTTGAGATGAAGGACGATTCCAACAGTGCATTATATATTGAGAATCTGATTGAGGAATATGTCACCTGCTATGATGATGTGGCCCAAATTCTGATTAAGGGTCTCTCAAGCAGAAAAATTGGTGCTACGAGCTTAAATTCAAATAGCTCGAGATCACATATCATTTTCACTTTTGTCATTGAGTCTTTGTATAAGGGGACCACAAAGGGTTTCAGTTGTTCAAAAGTTAGCAAAATCAGCCTTATTGATCTTGCTGGAATGGACAGTGATACAGTTGACGACGGAGGCAGCCAATGTCTCAGGGAGAGCAGCTATGTAAAGAAATCATTATCTCAACTTGGGCATTTAGTGGATGCTATGATCCACAAATCTCAGTCTGGAGAAAATGTAGACCTCGCACACAGTAAATCATGTTTAACACGTTTACTACAAGAATCACTTGGCAGAAATACCAAAGTTTCAGTAATATGCTCCGTCTCCCCTGATAACAAGAGCAATGGTGAAACCCTGCAGTCACTCGGCTTCGGAGAGCGTGTAAGATCCATCAGAAATGAGCCAGTTATCAATGTAATAAAGGAGGATGACATTGATTTGAGTGACAATATCCGGCACTTGAAGGAAGAACTTATTAAAGCAAAGGCTGATGTTCATGGCTCAGTTGGTAGTAAAAATGGATGCTTCCAGGGACATAATGTGCAGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAACCGCTCTCTACTCTTATCTAACTTTGATAATGATACTGATGATGATATAATTGTCAACGCGGATGACATAAGGCAATTACGCGAGCAAATTGATGAAATGGATAGTTCATGTGAAGGGAATCCAAAAGACATATTTATCAGTGAAGACCGTGTCCAGTTTTGTTCTATTGAGGAAAATTGTGATGAAGACTTGATCAGTGATGATGGAATTGAAAAAGTGGAGGTATGCAATGTAAAAAGATGGAGTCAGCCTTGTCATGAGGACATTATGGTATCAGCAGATAATACTCCAATACTTGATGGACCACAGTTGTCTGAATCTCCAAAATTCAGCAATAACCAACGGAAAAGTGTGGCTATTTCGTCGAGTTATCTTGGAAGAGGGAACAATTCATTTAAAAGGGGTGAGCATATGCGGTCCTCATTACAGTCAAGCAGGGCAGAATCCTTGGCAGTAAACCTTCAAAGGGGAATAGAGATAATTGACTATCACCAGCAGAACTCTGCATTGAACAGATCTTCAACTTCCTTCTCCTTTAAGCACTTAACTTTGACCCCAGAAATCGACAAGGTTGAATCTTATGATCAAACAATACAACAGAAACCTACCAGTGACAAAGTAACTGCGGCATTCATTTGTGCATATTGTAGGACAAAAGTTTCTAATCCTAATCAGGACTCCACTGAAGTCCAAGACAGCTTCAAATCCTCGTTTGAAACAGTTGGACAGAAGGGAAATCCTGAAGGATTGACAGATAAAGTTCCAAAACATTTGAATAAATTAATGGCAAAAGACATCATGAGAGAGAAGGAGCTTGAAAATGTTTGTAAGATGCAAGCGGCTAGAATTGAGCAACTTAATCAATTGCTTCTGAGAAGCACTTCCTCAAATGGTCATTTACCATCTATCATAGAGGAAAAAAGTGAAATGAAAGAAGTCCAGGAAGCGTTAGCTCAGAGAGATGTCTCTTTTGATTCAGCTGAGAAGGAATCACTTCTTGATGAAATTCGGAATCCAAGGAGCAAGCTGCAATTATATAGTGATGCACCAGCAAAAAAGTATACTGACAAACTTAGATCTTCTTTGATATCAAGATCCATACAACTGCAAAATAGTGGTGTATTTTCTCATGATAGTAGTAGTGAAGATCTAGAGAATGAAAGACAGAGATGGACAGAAATGGAAAGTGAATGGATTTGTCTTACTGATGAACTTAGAGCTGATCTTGAGTCCTACCGCCGGCGTGCAGAGATGTTGGAGACAGAGCTGAAGTTGGAGAAGAAGTCCACATCAGAGATGGATGATGTACTAAAAAGAGCAGTTATTGGGCATGGTAAAATGGTAGAACACTATGCTGATCTGCAAGAAAAATACGATGACTTGGTGGCTAAGCATGAAGCTATAATGGAAGGAATAGCAGATGTGAAGAAGGCAGCAGCAAAAGCTTCAAAGAAAGGTCAAGCCCGCTTTGCCAAATCTCTTTCCGCTGAGCTTTCTGTGTTAAGGGTAGAGAGAGAAAGGGAATCAAAGCTGTTGAAAAAGGAGAACCAGAATTTGAAGATTCAACTTCGAGACACTGCTGAAGCTGTTCAAGCTGCTGGAGAACTACTTGTTAGACTAAGAGAAGCTGAACAAGCAGCAGCATTTGCAGAGGAGAACTTTGCAAATTCACAAGAAGATAATGAAAATTTGAAAATGAAAATGGAGAAGCTGACAAGAAAACACAAGACGGAGATTGATACCATGAAGCAGTACCTTACAGAAAGCAAATTACCAGAGTCTGCACTGCAACCACTGTATGGACAGGATCCTAATGTTACACACAACAGTGCAACTTCCTCCGACACTTATTACGATGATCAGGCATGGAGAGCAGAATTTGGAGCAATATATCAGGAATACTACTAA 3303 0.4063 MKQKSNNATSGFLGSISSSSIRNLLPRSSTRRPTSSNPKSDAENTPPTHPNIPLNHPSKAFSHNNPHVKVVVRIRPESSNGKEGDWKVKKVSSDALCVGDRMYTFDEVFDTNSNQKDVFQSIGVPLVRDALAGYNTTILSYGQSGSGKTYTMWGPPSAMVEEPSCQSHQGIVPRIFRMLFSELERERLMSDQKQFIYQCRCSFLEIYDERIGNLLNPTQHNLEMKDDSNSALYIENLIEEYVTCYDDVAQILIKGLSSRKIGATSLNSNSSRSHIIFTFVIESLYKGTTKGFSCSKVSKISLIDLAGMDSDTVDDGGSQCLRESSYVKKSLSQLGHLVDAMIHKSQSGENVDLAHSKSCLTRLLQESLGRNTKVSVICSVSPDNKSNGETLQSLGFGERVRSIRNEPVINVIKEDDIDLSDNIRHLKEELIKAKADVHGSVGSKNGCFQGHNVQESLNQLRVSLNRSLLLSNFDNDTDDDIIVNADDIRQLREQIDEMDSSCEGNPKDIFISEDRVQFCSIEENCDEDLISDDGIEKVEVCNVKRWSQPCHEDIMVSADNTPILDGPQLSESPKFSNNQRKSVAISSSYLGRGNNSFKRGEHMRSSLQSSRAESLAVNLQRGIEIIDYHQQNSALNRSSTSFSFKHLTLTPEIDKVESYDQTIQQKPTSDKVTAAFICAYCRTKVSNPNQDSTEVQDSFKSSFETVGQKGNPEGLTDKVPKHLNKLMAKDIMREKELENVCKMQAARIEQLNQLLLRSTSSNGHLPSIIEEKSEMKEVQEALAQRDVSFDSAEKESLLDEIRNPRSKLQLYSDAPAKKYTDKLRSSLISRSIQLQNSGVFSHDSSSEDLENERQRWTEMESEWICLTDELRADLESYRRRAEMLETELKLEKKSTSEMDDVLKRAVIGHGKMVEHYADLQEKYDDLVAKHEAIMEGIADVKKAAAKASKKGQARFAKSLSAELSVLRVERERESKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAAFAEENFANSQEDNENLKMKMEKLTRKHKTEIDTMKQYLTESKLPESALQPLYGQDPNVTHNSATSSDTYYDDQAWRAEFGAIYQEYY* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1307 1100 MobiDBLite consensus disorder prediction 1 62 - -
Lja6g1307 1100 PANTHER KINESIN MOTOR DOMAIN PROTEIN 755 1078 - -
Lja6g1307 1100 PANTHER KINESIN-RELATED 755 1078 IPR027640 GO:0003777|GO:0007018
Lja6g1307 1100 PANTHER KINESIN-RELATED 45 755 IPR027640 GO:0003777|GO:0007018
Lja6g1307 1100 MobiDBLite consensus disorder prediction 1 65 - -
Lja6g1307 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 434 IPR027417 -
Lja6g1307 1100 PRINTS Kinesin heavy chain signature 133 154 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 PRINTS Kinesin heavy chain signature 264 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 PRINTS Kinesin heavy chain signature 299 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 PRINTS Kinesin heavy chain signature 353 374 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 Pfam Kinesin motor domain 96 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 Coils Coil 867 894 - -
Lja6g1307 1100 ProSiteProfiles Kinesin motor domain profile. 67 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 SMART kinesin_4 65 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g1307 1100 Coils Coil 967 994 - -
Lja6g1307 1100 PANTHER KINESIN MOTOR DOMAIN PROTEIN 45 755 - -
Lja6g1307 1100 Gene3D Kinesin motor domain 64 441 IPR036961 -
Lja6g1307 1100 Coils Coil 998 1046 - -
Lja6g1307 1100 Coils Coil 734 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1307 Lja-Chr6 37907893 37913610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1307 50 437 Miscellaneous Gene Families AT5G06670 32.668 3.31e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1307 K10400 - gmx:100784708 1442.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1307 6 37907893 37913610 Lja6g1307 6 37907893 37913610 ECH
Lja6g1307 6 37907893 37913610 Lja6g1307 6 37907893 37913610 PCT