Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1305 ATGGCATCAAATCAGAACCTGAAGGAGCTACAATGGGCTCTACAAGCAATCAATTCAGAGGTCCTAAACCTGCACAGTATCTCCTTCTACCTTTCTCAACCAACTTCAGCTTGTTACCAAGAAACAGATAACTCCATAAACATAAACATCTCCAAGGAAAATCTTCCATTCTTCTCTGACCTCTTGACAGAATTAGCAGCATCCAAGAGCACCAAATCCACCTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGAAATACAACAGGTAAGAAACCTTGGCACCTTGCTGGGGAATAATCAAAGCATACAGCAAGTTGTTTTTCGAAGAAACAGGTTCAATGGGAAAACCCTATCAGACCTTTCTGACATTCTGAAGGCAAATAAAGTGATCAAAGAGATCATGCTTTCAGAATCAGGCATTGGATCTGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGGTGAATGAGAGTTTGGAGGAGCTTCAGATATGGGAAGATTCCATAGGATCAAGAGGTGCTGAGGAGCTTTCCAAGATGATTGAAGTTAACCCAACTCTTAAATTGTTGACAATTTTTGACTCCAATGCAATTACAGCTACCCCTCTGATATCTGCAGTTTTGGCAAGGAACAGAAACATGGAAGTTCATGTTTGGAGTGGAGAAAATGGTGAAAAAAGTTCCAAGGTGGTTGAGTTTGTGCCTGGGAACAGCACACTTAGAATTTACAAGCTTAACCTCTCAGGTGCTTGCAGGGTTATATGCTCCTTAGGAATGAACTCCACTGTCAAATCTCTTGACATGACCGGAGTCAAGCTAAAATCGCGGTGTGCGAAGGAACTTAGATGGGTTTTAGAACAGAACCAGACCCTTAAAGAGCTGAACTTGTCCAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGACTCTTCAAGAATCATAGTCTGCAAACCTTACATCTAACTGGAAATTGGTTCAGTGGAGTAGGTGTGGAGCATCTACTCTGCCCTCTGAGTAGATTTTCAGCCTTGCAAATGCAAGCCAACATTACTTTGAAGTGTGTTACTTTTGGAGGGGGGAGAACAAGAATAGGAAGGGATGGTTTAGCTGCTCTCACACAGTTTCTAACAACCAATGAGACAGTGAGGAAGTTGGGAATACATGATGATGAGAGTTTGAGATCAGATGACTATGTTAAAATCTTCAAGAGCTTAGAGAAGAATGCTAGCTTGAAATGTTTGTCATTGCAAGGATGCAAAGGTGTGCAAGGAGAGACGTTGCTGCAGACAATTATGGAGACACTGCACATAAATCCTTGGATTGAAGATATTGATCTCTCCAGAACACCTTTACACAGTTCTGGAAAGACAACTGGGATTTATCAAAGATTGGGGCAGAATGAGAACACTGAACCAGAAATGGATTTGCTCAAGGACATGCCACTAACAGAACCCAAGAGTTGCAGAGTTTTCTTCTGTGCGCAAGAATGTGCAGGCAAAACAACACTTTGTCATTCAATATCACAAAATTTCTCTGCTTCGACGCTTCCCTACTTGGATCAAGTCAGAACAATTGTGAACCCTGTGGAGCAGGCTGTAAAAACAGTAGGAATGAAGATAAAAACTTTCAATGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGTCAACATGAGTTTTTCTCTTTACATGATCTAATGTTCCCAGGGCATGGTAGTGCATCATTTTTCATTATCATATTGAGTTTATTCAGGAAGCCAAGTAACAAAGAACCAAAAAGCACAGAAGAGATTGAAGAAGACCTGCAATATTGGCTTCGGTTCATAGTTTCCAACTCCAAAAGAGCAGTGCAGCAATGCATGCTACCAAGTGTTGCTGTTGTTCTCACACACTTCGATAAAATTAACCAATCTTCGCAAAATTTTCAGCAAACAGTTGATTCCATTCAGAGATTGAGAGATAAGTTCCAAGGCTTTGTAGACTTCTACCCAACTGTATTTACAGTTGATGCAAGATCATCAGCATCGGTTAGTAAACTCACTCATCACATCCGAAAGACGTGCAAGACGATTCTCCAAAGAGTGCCGCGAGTTTATCAACTTTGCAATGATCTCATACAGATTTTATCAGACTGGAGATCCGAGAATTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTAAAAGTCCCACCTTTGAGAATTCGATCAAGACATTATAACAAAGAGGTGGTGGAAATGAAGAGAAAAGCTGTTGCAACTTGTCTTCATCACATTGGTGAGGTGATTTACTTTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTTTGTGGTGAAGTACTTGGTCAGCTCATAAAACTGAATGTTAGAAAGCAACACTCCTCAGAAAACAGTGGATTTATTAGCAGGAAGGAACTGGAGAAAATCTTGAGGGGAAGCTTACAGAGCCCGATTCCCGGTATGGGTTCAAAGGTGTTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTCTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTGTTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAGGTGGCAGCTAAGCACACCAGATTGCATTTATGCAGGACGTCATCTCGAGTGTGATGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGAATAAAGGCTCTACAGAATCAACATGGTGCAACTTACTTTCTTGAGAAGTACCTCATTTCAATCAGCATTAATGGAATCTACATCAGAGTAGAGCTTGGAGGACAACTGGGTTACTACATTGACATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCAGCAATTCAAAGCGTTTGCCATGGAATCACCATGACTGAAAATGTCATTAGACCTGAATGTGTGCGAAATTTAACACCTCCTAGATACAGAAGAACTCAATTTGTTTCTCTTCAGCAACTGAAACAAGCACTACTTTCACTTCCAGCAGAAAGCATGTATGATTATCAACACACATGGAGTTCAGTTCTGGACTCAGGTAGGCCTACTCTCCAAGAAGGGTTTGATTTAGCACGAGACCTTTTATCGGATGATGATTTCCGGGAAGTGCTGCATCGAAGGTATCATGACCTGCACAATCTCGCTCAAGAGCTGCAAGTCCCACCTGAAAACAACATAGAAGGGCAAGATCAATCTATAACTTCAAGCAGTGAATCTGGAACAGTTGACCCAACCTTTGGGGGCATTGCAAAAGGGGTTGAAGAAGTTTTGCAAAGACTAAGGATTATTGAACAAGAAATAAGAGACTTGAAGCAAGAAATCCAGGGGCTGAGATATTATGAACATAGACTCCTCCTCGAGCTTCATCGCAAAGTGAACTACATAGCAACCTTCAATCTTCAGGTTGAGGAGAGGAAAGTACCTAACATGTTCTACTTTGTAAACACAGAAAACTACTCAAGAAGACTGATCACAACCATGGTTTCTGGCATGACTGCTCTCCGGCTCCACATGTTGTGCGAGTTCCGGGGACAGATGCACGTTGTTGAGGATCAAATGGGGTGTGAAATGATGCAAGTTGATAATATGGCTGTGAAGGCTTTGGCTCCATACATGAAGAAGTTCATGACGCTGGTAACTTTCGCTCTTAAAATCGGAGCTCATCTCGCGGCTGGAATGGGGCAAATGATACCAGACTTGGGCAAGGAAGTGGCTCATTTGACTGGCTCTTCAGTTCTCTTTGGTGCAGCTGCAGCTGGTGCTGTAGGGGCTGCAGCAGGTATGGGACGGAGAAACAGGTCCATGGAAGGTTCAAGAGGCATTCAACAGGATTTAAGAGCTGCACAGCAATGGGTGGTTGATTTCTTAAGGGAAAGGAGATGCTCCACAGGGAAGGATATTGCAGAGAAGTTTGGCCTGTGGAGAGTAAGGTACAGGGACAGTGGTCAAATTGCATGGATCTGTAGGAGGCACATTTACTCCAGATCTGCAGAGATAATTGAAGTGCCAGTTTGA 4128 0.4232 MASNQNLKELQWALQAINSEVLNLHSISFYLSQPTSACYQETDNSININISKENLPFFSDLLTELAASKSTKSTLRNLEFHRVEWEIQQVRNLGTLLGNNQSIQQVVFRRNRFNGKTLSDLSDILKANKVIKEIMLSESGIGSVGAGLIASALMVNESLEELQIWEDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLARNRNMEVHVWSGENGEKSSKVVEFVPGNSTLRIYKLNLSGACRVICSLGMNSTVKSLDMTGVKLKSRCAKELRWVLEQNQTLKELNLSRTCLKDKGIVYVAAGLFKNHSLQTLHLTGNWFSGVGVEHLLCPLSRFSALQMQANITLKCVTFGGGRTRIGRDGLAALTQFLTTNETVRKLGIHDDESLRSDDYVKIFKSLEKNASLKCLSLQGCKGVQGETLLQTIMETLHINPWIEDIDLSRTPLHSSGKTTGIYQRLGQNENTEPEMDLLKDMPLTEPKSCRVFFCAQECAGKTTLCHSISQNFSASTLPYLDQVRTIVNPVEQAVKTVGMKIKTFNDEDTKISIWNLAGQHEFFSLHDLMFPGHGSASFFIIILSLFRKPSNKEPKSTEEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQSSQNFQQTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSDWRSENYNKPAMKWKEFGELCQVKVPPLRIRSRHYNKEVVEMKRKAVATCLHHIGEVIYFDELGFLILDCEWFCGEVLGQLIKLNVRKQHSSENSGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQRWQLSTPDCIYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKALQNQHGATYFLEKYLISISINGIYIRVELGGQLGYYIDILACSTKNLTETLRVIQQLIIPAIQSVCHGITMTENVIRPECVRNLTPPRYRRTQFVSLQQLKQALLSLPAESMYDYQHTWSSVLDSGRPTLQEGFDLARDLLSDDDFREVLHRRYHDLHNLAQELQVPPENNIEGQDQSITSSSESGTVDPTFGGIAKGVEEVLQRLRIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYIATFNLQVEERKVPNMFYFVNTENYSRRLITTMVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKALAPYMKKFMTLVTFALKIGAHLAAGMGQMIPDLGKEVAHLTGSSVLFGAAAAGAVGAAAGMGRRNRSMEGSRGIQQDLRAAQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDSGQIAWICRRHIYSRSAEIIEVPV* 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1305 1375 MobiDBLite consensus disorder prediction 1092 1112 - -
Lja6g1305 1375 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Lja6g1305 1375 Pfam Leucine Rich repeat 287 308 IPR001611 GO:0005515
Lja6g1305 1375 Gene3D Ribonuclease Inhibitor 47 217 IPR032675 -
Lja6g1305 1375 Gene3D Ribonuclease Inhibitor 351 477 IPR032675 -
Lja6g1305 1375 SUPERFAMILY RNI-like 11 459 - -
Lja6g1305 1375 Pfam C-terminal of Roc, COR, domain 750 925 IPR032171 -
Lja6g1305 1375 SMART LRR_RI_2 288 315 - -
Lja6g1305 1375 SMART LRR_RI_2 128 155 - -
Lja6g1305 1375 SMART LRR_RI_2 316 343 - -
Lja6g1305 1375 SMART LRR_RI_2 156 183 - -
Lja6g1305 1375 PANTHER PROTEIN TORNADO 1 1 1364 - -
Lja6g1305 1375 Coils Coil 1124 1151 - -
Lja6g1305 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 683 IPR027417 -
Lja6g1305 1375 Gene3D Ribonuclease Inhibitor 221 350 IPR032675 -
Lja6g1305 1375 Gene3D - 490 695 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1305 - - gmx:100817598 2432.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1305 6 37893597 37898640 Lja6g1305 6 37893597 37898640 ECH