Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1302 ATGGCTACGCTGAATTCGATTTCAACCGCACTGAAGAAGAATACTTCGACGAACAATCACATTCCCAACCCAGAAACCCTAGATGTTGAACCTATCCACCGAACCACGAAAGATGCGAACTTTCCGGCGAACCCTAACGACCCACCATCAAATCAGACCAATGATTCAACTGGGGTGTTCCGGAAAAACTACATCGTTCCGGGCTCGGTTAAGCCTAGCTATGAGTTGAGCGTTCTGTGTGAGAAAATGGATGGTGTAGGGTTGAGGAATTTCGTTAAAGCCCGCTTTGCGGATCGAATTAGGGTTCAGGCTGAGCTTCCTGGGGCGTTGCGGTGCGCGCCGGACCCGGCTGAGATGGTTCTGCAATCATTGGAAGGGCTTAATGGGGTGGGTGGTAGTTCCAAGGATAAGGAATCGAAGAAGATGAAAAAGATTTGTATTATGTTGTTGAAGCAGTTGAGGGTTGCTGGTGTGAGTGTGAGTTCTAAGGCCAAGGAGAAGGCGTTGAAGTTGGCTCTGGAGTGGAGAAAGTGGTTGGTGGTTGATGCTGCCAGCGCTTTGGGGGCGATCGGATTTTTAAATATTGTTTCCGCCTTTGGTTTGGTTTCTGAATTCAGCACGGATGAGCTTATTTCCTTTTCTGCCTTGGCCGCAGTTAATGATGATTTCCCGGAGCTGTACCGGGCCATTTGTTTGACGGATGGAGTACCCAATTGTTTGACGGGTAGAGTACCCGATATTATTCAGAAGCTTATAAATAAGGGAAAATATAGCCTGGCTGTCAAGTATGTTTTGGAGTTTGATCTGGCTGATACGATTCCACCTGTTCACATTTTGGAAGCTTGTGTGGATGAATCTAAGAAACTTGCTATACGACTTTCCCAGGAAGAAAAGCCACTGCTTGAGATTACAGCCAGAGAAATTTGTTCACTGAAATTGGTAATTAAGATCATTGATAGTCACAAGCTTGAATGTGATTATCTACGAGCTAGCCTTGAGAAGCGGATAGAGCAACTGAAGAGGCAGAAGAAGGCATGTATGAAATTGCTGCCACCAGCTTCTTCTTTAAAGCCTCCTCAGCACGACCAGCAAAGTGGGATCAAGCGCCCTCGGAGTTCTGCTCCGGTTGGTACTGAAGCTGTCCGTAAGAATTTTAACAATGGCAATACAGCAATACACCAGTACCAACAATCTCTTGTCCATCCATCAGGTTTGTTTCCTGAGCATCCAAATCCATACATGAGCTTGCCAGCCATGCCATTTCGCATGGTGGCCCCTACCCCAACTATTCCTTTTTATACCTGTCCTTCAGCTGGGCCTTATGGTCATGCCGGTGGCTCAATGGGTCACAGTGGCAATCCGAGTCTAGGCAGTTCTCATCTAAAAAGAAAAAAAACCTCATCAGAGCCTCATGTTCCATCTTGTTATCATGATAGAACCTCTTCTTATGGTGGTGCTAACCTGCAGCATAATTACAAAGCATCATATAATCCTCTATAG 1500 0.4607 MATLNSISTALKKNTSTNNHIPNPETLDVEPIHRTTKDANFPANPNDPPSNQTNDSTGVFRKNYIVPGSVKPSYELSVLCEKMDGVGLRNFVKARFADRIRVQAELPGALRCAPDPAEMVLQSLEGLNGVGGSSKDKESKKMKKICIMLLKQLRVAGVSVSSKAKEKALKLALEWRKWLVVDAASALGAIGFLNIVSAFGLVSEFSTDELISFSALAAVNDDFPELYRAICLTDGVPNCLTGRVPDIIQKLINKGKYSLAVKYVLEFDLADTIPPVHILEACVDESKKLAIRLSQEEKPLLEITAREICSLKLVIKIIDSHKLECDYLRASLEKRIEQLKRQKKACMKLLPPASSLKPPQHDQQSGIKRPRSSAPVGTEAVRKNFNNGNTAIHQYQQSLVHPSGLFPEHPNPYMSLPAMPFRMVAPTPTIPFYTCPSAGPYGHAGGSMGHSGNPSLGSSHLKRKKTSSEPHVPSCYHDRTSSYGGANLQHNYKASYNPL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1302 499 Coils Coil 329 349 - -
Lja6g1302 499 MobiDBLite consensus disorder prediction 36 58 - -
Lja6g1302 499 PANTHER FRIGIDA-LIKE PROTEIN 29 497 - -
Lja6g1302 499 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 29 497 - -
Lja6g1302 499 MobiDBLite consensus disorder prediction 39 58 - -
Lja6g1302 499 Pfam Frigida-like protein 70 344 IPR012474 -
Lja6g1302 499 MobiDBLite consensus disorder prediction 357 371 - -
Lja6g1302 499 MobiDBLite consensus disorder prediction 444 480 - -
Lja6g1302 499 MobiDBLite consensus disorder prediction 350 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1302 Lja-Chr6 37848993 37853103 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1302 - - lja:Lj6g3v0802240.1 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1302 6 37848993 37853103 Lja6g1302 6 37848993 37853103 ECH
Lja6g1302 6 37848993 37853103 Lja6g1302 6 37848993 37853103 PCT