Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1290 ATGCCGATGAAAGCTTTGGCCAAAAACAGTGGATACCCATTTCCCTTGGTGGCAAAATGTGTTGAACAACCATGCAATTTTGGTGGAGTTTCATCGATTTTAGGTAGTGGGAGTGATTTCAAACCGTTTGGTAGATGTGACATGAGATGTTTGGTTACAAGTGGTAAGGATTTGAGTGGAACCAAATCAAGCAATGATGTTTCTGAAGAGGACATGAAATTCCCGAAATTTGTAGGGGAGTTAGTGAAGAAAGGGATCGTTTTGGCGGCGACTGTTTGTGGGGTATTAATGTTTGGATGTGAAAGAGCCTTTGCCATGGAGGGTTTGGTGAGTGTGATGGAACAGAGCAAAGTGTTTTTTAGGAATGCTTGGCCTAAAGTGTTGCCAGTTCTTCAGATATTTAAGGAGCAAGGGGTGGTGTTGGCTGTACTTTTGGCACTTTCTGCTTTCTTCTCAATGGCAGAGACTTCAATTACTACACTTTGGCCTTGGAAGATTGTAACTCTGGAGGATATTGTTGAGGAATTTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAAGAGATTCAGAAAAAAACAGGCAACATAGTAATGCTAGATGAGGGTATATTCGATGTAGATGCAAACACATCTATTGATCAACTCTCAGAAGATTTGAACATCAAGATGCCTGAGGATCACCAATATGAGACAGTATCTGGCTTCGTATGTGAAAATTTTGGCTACATCCCCAAGATAGGTGAGATCATAGAAGTAGCTCTTGAAAGAAAAAATGAAGACGATAACGATGCCCCCATTGCTGACCACCAGGATCAGAAAGAGACTTTCAAACTTGAGATAGAACTCTAG 852 0.4085 MPMKALAKNSGYPFPLVAKCVEQPCNFGGVSSILGSGSDFKPFGRCDMRCLVTSGKDLSGTKSSNDVSEEDMKFPKFVGELVKKGIVLAATVCGVLMFGCERAFAMEGLVSVMEQSKVFFRNAWPKVLPVLQIFKEQGVVLAVLLALSAFFSMAETSITTLWPWKIVTLEDIVEEFVGEIFDENDSKEEIQKKTGNIVMLDEGIFDVDANTSIDQLSEDLNIKMPEDHQYETVSGFVCENFGYIPKIGEIIEVALERKNEDDNDAPIADHQDQKETFKLEIEL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1290 283 SUPERFAMILY FAD-binding/transporter-associated domain-like 196 254 IPR036318 GO:0050660
Lja6g1290 283 Gene3D - 193 282 IPR016169 -
Lja6g1290 283 Pfam Transporter associated domain 199 256 IPR005170 -
Lja6g1290 283 PANTHER BNAC03G73630D PROTEIN 166 275 - -
Lja6g1290 283 PANTHER BNAC03G73630D PROTEIN 49 166 - -
Lja6g1290 283 SMART CorC_HlyC_2 198 283 IPR005170 -
Lja6g1290 283 PANTHER HEMOLYSIN-RELATED 49 166 - -
Lja6g1290 283 PANTHER HEMOLYSIN-RELATED 166 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1290 Lja-Chr6 37677048 37680994 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1290 - - lja:Lj0g3v0112359.1 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1290 6 37677048 37680994 Lja6g1290 6 37677048 37680994 ECH