Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1244 ATGTCTCTTGGGTATGCCGAGAAGCTTTCCTACATTGAAGATGTGGGCAACGTCGGAATGTCCGAATTTTTCGACTCTTCCCATGTTTTGCGAGAAAAAATAGAACGACTTGCTATCATGATAAAAAAGAGCAAGCATCTAGTGGTATTTACAGGTGCAGGAATTTCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGTATTTGGACACTTCAGCGTGAAGGTAAAGCCTTGCCAGGAGCATCATTGCCATTTCATCGTGCGGTGCCAAGCTTGACTCACATGGCTCTGGTTGAATTAGAAAAGGCTGGTATTTTGAAGTTTGTTATCAGTCAGAATGTCGATGGTCTCCATCTTCGGTCTGGATTACCAAGGGAAAAACTGTCTGAATTGCATGGAAATTCCTTCATGGAAACATGCCCTTTGTGTGGTGCTGAGTACTTTCGCGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACCTCACGGCGCTGTTCAGATGCAAAATGTCGGACAAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTCGAAAGGAAATGGCTCCTGCAGAGAAGCACTGCAAACAGGCAGATATAGTATTATGCTTGGGGACAAGTCTGCAAATAACTCCAGCATGCAACTTGCCTCTTAGAGCTATTCGTGGTGGAGGTAAAGTTGTCATTGTAAATCTCCAGAAAACACCTAAGGATAAAAAAGCCAGTCTTGTCATACATGGGTTTGTTGATAAGGTAATTGCAGGTGTCATGGACAAGCTTAATCTGCAAATTCCTCCATTTGTCCGGATTGATTTTTTCCAGATTATTCTAGTGCATGCTCTGAGCAATGATAAAAGATTTGTAAACTGGTCTCTCCAAGTTGCTAGTTCTCATGTGCAGAAAGCAGCATTGCCTTTCATCGAGTCTGTTGAGGTCTCCTTCACAGACAAGGAAAATTACAAAGCAGCTATTCTGGATAAACAACCATTTCAGCTTAAAAGGAGAACAGCATATGACAAAGCATTTGAAATGGTTCTGAAACTCAATTTTGGTGACGGCTGTGGTTGCCCGTCTCTTGAAATCGATGTCCCGGTTGATTTTAAGTTTACAACAGATGGCTTCAACTTGGACAAGGACGTCATATTCCAAAAGCTGAGAGACAAGGCAATTCGCAAATCAAAATGCGGTCAGAATGCTGTTGTTGAGAGAAAGACAATCTTGACACCAAGAAGTGATGTCACTACCTATGCTGTTGTGACCAATGTTATTCAGTACAACAAAACATGTAAAGAAGCTCTTGATTCTGTTAGCAATGGTGATGTTAAGAAACGAAAAGCAAGCGTGACTGGTAAAAGATCTTCCAGGAAGCGTTCAAAAGGGTCCAAAGTGTAA 1404 0.4202 MSLGYAEKLSYIEDVGNVGMSEFFDSSHVLREKIERLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPGASLPFHRAVPSLTHMALVELEKAGILKFVISQNVDGLHLRSGLPREKLSELHGNSFMETCPLCGAEYFRDFEVETIGLKETSRRCSDAKCRTRLKDTVLDWEDALPRKEMAPAEKHCKQADIVLCLGTSLQITPACNLPLRAIRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDKLNLQIPPFVRIDFFQIILVHALSNDKRFVNWSLQVASSHVQKAALPFIESVEVSFTDKENYKAAILDKQPFQLKRRTAYDKAFEMVLKLNFGDGCGCPSLEIDVPVDFKFTTDGFNLDKDVIFQKLRDKAIRKSKCGQNAVVERKTILTPRSDVTTYAVVTNVIQYNKTCKEALDSVSNGDVKKRKASVTGKRSSRKRSKGSKV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1244 467 Gene3D - 37 262 - -
Lja6g1244 467 MobiDBLite consensus disorder prediction 452 467 - -
Lja6g1244 467 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 466 - -
Lja6g1244 467 MobiDBLite consensus disorder prediction 441 467 - -
Lja6g1244 467 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 466 - -
Lja6g1244 467 SUPERFAMILY DHS-like NAD/FAD-binding domain 5 291 IPR029035 -
Lja6g1244 467 Pfam Sir2 family 52 74 IPR003000 GO:0070403
Lja6g1244 467 Pfam Sir2 family 88 216 IPR003000 GO:0070403
Lja6g1244 467 Gene3D - 135 184 - -
Lja6g1244 467 ProSiteProfiles Sirtuin catalytic domain profile. 35 269 IPR026590 -
Lja6g1244 467 CDD SIRT7 45 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1244 Lja-Chr6 36457940 36471432 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1244 K11416 - gmx:100803586 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1244 6 36457940 36471432 Lja6g1244 6 36457940 36471432 ECH