Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1239 ATGAAGCTGGGGTTGCTCAATGTTGCCATTGTAGTGGTAATTTTATTATGCAGCTTGAATACATTGCTTGGGATTAGGTTTATGATTGATAGAGAAGAATGCTTCTCTCATAATGTTCAGTATGAAGGGGATACAGTTCATGCTTCATTTGTTGTCATCAGCACTGATTCATCTTTGCACTATACTCAAGAAGGTTTAGACCTTGTGGTGAAGGGACCTTCTGGTGATCAAATTCAAGATTTTCAAAACAAGATAAGTGAGAAATTCGAATTCGTGGCTCGACACAAAGGACCCTATCGCTTCTGCTTCACCAATAAGTCTCCTTATCGCGAAAAAATCGATTTTGATGTGCATTCAAACCACTTTCCACCCACTGATCAGCATGTGAAAGATGAGCATTTGACTCCTTTGTTAGATCAGATCATAAAGTTAGAGGAAGCTCTTTTCAACATTCAGTATGAACAGCATTGGCTTGAGGCACAGACAGAACGCCAGGCAATAGTAAATAATGCTATGAGCTCCAGAGCGATTCACAAGGCCATACTTGAATCAGCAGCATTAATCGGTACCAGCATTCTGCAAGTTCATCTTCTTCACCGCCTCTTTGAAAGAAAGCTTGTGACGTAG 627 0.4051 MKLGLLNVAIVVVILLCSLNTLLGIRFMIDREECFSHNVQYEGDTVHASFVVISTDSSLHYTQEGLDLVVKGPSGDQIQDFQNKISEKFEFVARHKGPYRFCFTNKSPYREKIDFDVHSNHFPPTDQHVKDEHLTPLLDQIIKLEEALFNIQYEQHWLEAQTERQAIVNNAMSSRAIHKAILESAALIGTSILQVHLLHRLFERKLVT* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1239 208 SMART EMP24_GP25L_2 24 203 IPR009038 -
Lja6g1239 208 Pfam emp24/gp25L/p24 family/GOLD 30 203 IPR009038 -
Lja6g1239 208 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2 206 IPR015720 -
Lja6g1239 208 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 2 206 - -
Lja6g1239 208 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1239 - K20347 egr:104450412 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1239 6 36308179 36310201 Lja6g1239 6 36308179 36310201 ECH