Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1236 ATGGTAGCAAGAATCAAGCAAACTTCTACTGACTCTCCCAATCCAAAACCAGAGGTTGGAGAGATTGACACTAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTGTCTCTATTTGGTGAAGGTGCTTTTTCTGGTGAAAAACCTATGTATAAGAAGTCAAAACCGTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACAGAACTTCATGTAGTGCAAAAGGAGCTGAACAAGTTAAAGGATCAAGTAAAGAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGGACGGTTGACGATCTGACACAAAAGCTAAAAGTTATCAGTGAATCTAGGGAGTTAGCAATCAAGGCAACAGAGGCTGCAAAATGTCAGACAAAACAACTTACAGAAGAAAAATATGGTGACCCGGATGGAACTAATGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGGTATGCATCTGTGATGACAGAACTTGATGCTGCAAAGCAAGAACTGAGGAAGACTCGTCAGGAGTATGAGTCATCCTTGGATGCAAAGTTGTCTGCTTTCAAGCAAGCTGCAGAAGCTCAAGGAGCAATGAAGGAAAATACAGAAAGAATGGCTGAGCTGTCTAAAGAAATTTCAGCCGTAAAGGAGTCAATTGAGCAAGCGAAGCTTGCATCTGTGGAAGCACAGCAACAACAAGCGACAATATTAGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCCTTGAACAATCTGCTAAGAAGTTAATAGCTTTGAGAACAGAATTCAATCCTGAGCTTACCAAAAATCTTGAAGTACAGCTGGCCGAGATAGAGAATGAAATTGGAGCTCTGCAAAAGCAAATGGAAAGTAAAAGGACGTCCGACTTGGACTCTGTGAAAAGTATCACTTCAGAACTTGATGGTGCTAAGGACTCACTGCAGAAAGTAGCAGATGAGGAAAACTCTCTTAGAAGCCTGTTGGAAACTCTTAAGGTGGAACTAGAAAATGTAAAGAGAGAACATTCTGAATTAAAGGAGAAAGAAGCTGAAACTGAATCCATTGTTGGTAATCTGCATGTCAAGCTTCGCAAAAGTAAGTCTGAGCTTGAAGCCTGCTTGGCAGAAGAATCCAAAGTTAGAGGTGCAACTGAGGAGATGATCTTGACGCTGAGTCAGCTGACAGCTGAAACTGAAAATGCACGGCGGGAAGTAGAAGATATGAAGAACAAGACAGCCGAATTGAAGAAGGAAGCAGAAGTTACCAAACTTGCATTAGAAGATGTGGAGAAAAACCTTAAAGTAGCACTTGAAGAAGCAGAAGAAGCCAAAGCAGCTGAGGCTGGTGCTCTCAACCAGATTACGGCATTATCTGAAAGGGCTATCGCTGCACGCTCGTCAACATCTGAATCTGGTGCTGTAATTACAATCTCGAAGGAGGAATTTGAGGCACTAAATCGGAAAGTTGAGGAGTCTGATAAATTAGCCGACATGAAAGTCGCTGCTGCCAAGGCTCAGGTTGAAGCTGTGAGGGCTAGTGAAAATGAGTCTATCAAAAGGTTGGAGACAACTCAGAAGGAGATTGACTATATGAAGACTGCGACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCAGCAAAGAGGGCAGTGGAGGGTGAGCTTCGAAGGTGGCGCGAGCGGGAGCAGAAAAAGGCAGCAGAAGCTGCATCTCGAATATTGGCTGAAACACAGGGGTCGCCTCAAGCATCTCCTCAGCACTATATGATTCAAAAGCAGAATCCTCCTCATACAACAGTGGAGGTCAAGAAGTTTGAAAAGGAGAAGGTTTCAGTTTCAAAGAAAGTTCTCTTGCCTAATATCAGCGGTATTTTCCACAGGAAGAAAAATCAGGTTGAGGGTGGATCTCCTTCTTATCTGCCTGGTGAAAATCCTGTATGA 1962 0.4322 MVARIKQTSTDSPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPMYKKSKPYSAERVLAKETELHVVQKELNKLKDQVKNAETTKAQALVELERAQRTVDDLTQKLKVISESRELAIKATEAAKCQTKQLTEEKYGDPDGTNGAWKEELETAVKRYASVMTELDAAKQELRKTRQEYESSLDAKLSAFKQAAEAQGAMKENTERMAELSKEISAVKESIEQAKLASVEAQQQQATILAEKDVLRQSYKATLEQSAKKLIALRTEFNPELTKNLEVQLAEIENEIGALQKQMESKRTSDLDSVKSITSELDGAKDSLQKVADEENSLRSLLETLKVELENVKREHSELKEKEAETESIVGNLHVKLRKSKSELEACLAEESKVRGATEEMILTLSQLTAETENARREVEDMKNKTAELKKEAEVTKLALEDVEKNLKVALEEAEEAKAAEAGALNQITALSERAIAARSSTSESGAVITISKEEFEALNRKVEESDKLADMKVAAAKAQVEAVRASENESIKRLETTQKEIDYMKTATQEALKKAEMAEAAKRAVEGELRRWREREQKKAAEAASRILAETQGSPQASPQHYMIQKQNPPHTTVEVKKFEKEKVSVSKKVLLPNISGIFHRKKNQVEGGSPSYLPGENPV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1236 653 Coils Coil 548 568 - -
Lja6g1236 653 MobiDBLite consensus disorder prediction 1 15 - -
Lja6g1236 653 Coils Coil 61 116 - -
Lja6g1236 653 Gene3D - 272 394 - -
Lja6g1236 653 Coils Coil 153 187 - -
Lja6g1236 653 Coils Coil 274 301 - -
Lja6g1236 653 Coils Coil 320 361 - -
Lja6g1236 653 MobiDBLite consensus disorder prediction 582 604 - -
Lja6g1236 653 MobiDBLite consensus disorder prediction 1 28 - -
Lja6g1236 653 MobiDBLite consensus disorder prediction 564 604 - -
Lja6g1236 653 Pfam Weak chloroplast movement under blue light 21 571 IPR008545 -
Lja6g1236 653 Coils Coil 195 236 - -
Lja6g1236 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 4 630 - -
Lja6g1236 653 Coils Coil 397 452 - -
Lja6g1236 653 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 4 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1236 Lja-Chr6 36245884 36250633 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1236 - - gmx:100816361 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1236 6 36245884 36250633 Lja6g1236 6 36245884 36250633 ECH
Lja6g1236 6 36245884 36250633 Lja6g1236 6 36245884 36250633 PCT