Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1228 ATGGAAATGGTTCCATACTCTGACCCCAACACCACCACTCCAGCATGGCAGGACATGTTCCGATCCGCCTCCACCAGAAAGCCCGACCCCACCCCTGAGCCCCACGCGCCGCCTTCAATGAACCACGCGCAGTCTCGCTCATCCAACGCGCCGCCGAATCGCCCCGACGACGGCGACCCAGATGGGAAAAACACATTCTCCGGCGATCCCCAGGTGCGACTCGCTCTCTACATTGCGATGGCTCATGCGGGTCTTGGCTTCGCCATCTTCATCCTCTACACTGTGTCCAAGCTCTTGGATCAGTACCTGAGACCTCTTCAGTGGGCTGTGATATGCTCCATCCCTCTGAGAGGGATTCAGCAGACCCTCGTCGCCTTCTGGTCGGAACCCCTCATGTTGGGTCTCACGGAGACCGTTCTCGCCGTTCCTGTTGCGGTGTTCAGGGTCTTTGTTGGCACCCTCGTTGAGATTCGTGAGGCTTCTTTCAGGGTCATTCTCAGGAAACCCAAGCCTCAGACCAATCACCCTTCTAGGAAGCGTAGTGGGTTTTCCAATATGCTCCGGTTGCTTGTGTCTTTTGGGATGTTCATCATTGCTTATGAGAGGCTTGGTACTTTTGGTGCGCTATCTCTTCTTGGCTTGGGGTTTCTGTTCAGCTCTAAGAATGTGAATTCCACTTTGCACACTTTGTCTTCTTTGAGGACTAACAGCTTCAGGCGTAGTGCAATCAGTGCTTTCTTTACTAGAGGGGTGTTGAAGAAGTTGAAGACCCTTGTGGCTGTTGGGCTGATTGTTGGTATGATTTTGGGGTTTTTGACTGGGTTGATCTTTTTCTCTTATAAGATTGGTGTTGAAGGGAAAGATGCAGTGGTTTCTCTCAAATTGCATGTGGAAGAGAGCAATTATACTGAGAGAATTGGTGTTAAGCAATGGATGGAAGAGAATGATGTTGCTGGGATGGTGGATAGTTACACTACCAAGTTTTATGAGACTGTGTCTGATCAGATAGATGGGTTGGCTGTGCAGTACAACATGACTGAATTTGTGACTGGCATTAAGCATTTTGTGATATCTACACCTGCTAACTCTTCAGCTTCTTCAAGTGCTTTGATGGCCCCCTCACCCTACACACACAAGTTCGTGAGTTTGAAGACCCGGGTTAAGAACCGAGAATGGAGCCAGATTTATACAGAGCTCGATTCCCTTGTCCGGGAGCTTGTAATCACCCGCGAGGATTTAGTTGAGAAGGCAAAAGGGTTTGCCGTTAAAGGAATTGATGTGTCTCAGCGTGTGTTTGCTAGCAGTAGAACTGTGCTTGGAAGCAGTACCAAGTTTATGTTCTCCATTGCAAATTCCATAATCTCTGGAGCTGCAGAGGTTTTCAATTTTGTGTCTCAGTCAATGGTGTTCATTTGGGTTTTGTATTATCTCATCACATCAGAGTCTGGTGGAGTGACTGAACAAGTGATGCACATGCTTCCAATTTCAAAATCCACTAGGGTTAGGTGTGTTGAAGTTTTGGATAAAGCTATTTCAGGAGTGCTTTTGGCCACTGCTGAGATTGCATTCTTTCAGGGATGTCTTACTTGGCTTCTGTTTAGGTTGTACAAAATACATTTCGTGTACATGTCAACTATCCTTGCTTTCATGAGTCCTCTGCTGCCAATTTTTCCTTCTTGGCTTGCAACAATTCCAGCAGCTACACAACTAGTGCTTGAAGGAAGATATATACTGGCCATTATCTTGTCTGTTTTGCACCTTTTCCTCATGGATTATGGGGCATCAGAGATTCTGGAAGATGTGCCTGGGAATAGTGCATATCTTACTGGGCTGAGCATCATTGGGGGAATGACATTGTTCCCATCAGCTGTGGAGGGTGCTATTATGGGTCCATTGATAACTACAGTGATGATTGCTTTGAAGGATTTGTATGCTGAATTTGTATTGGAAGAACCTAAGGACAAGGCTAAGCAGAAAACAAGCTAA 1986 0.4688 MEMVPYSDPNTTTPAWQDMFRSASTRKPDPTPEPHAPPSMNHAQSRSSNAPPNRPDDGDPDGKNTFSGDPQVRLALYIAMAHAGLGFAIFILYTVSKLLDQYLRPLQWAVICSIPLRGIQQTLVAFWSEPLMLGLTETVLAVPVAVFRVFVGTLVEIREASFRVILRKPKPQTNHPSRKRSGFSNMLRLLVSFGMFIIAYERLGTFGALSLLGLGFLFSSKNVNSTLHTLSSLRTNSFRRSAISAFFTRGVLKKLKTLVAVGLIVGMILGFLTGLIFFSYKIGVEGKDAVVSLKLHVEESNYTERIGVKQWMEENDVAGMVDSYTTKFYETVSDQIDGLAVQYNMTEFVTGIKHFVISTPANSSASSSALMAPSPYTHKFVSLKTRVKNREWSQIYTELDSLVRELVITREDLVEKAKGFAVKGIDVSQRVFASSRTVLGSSTKFMFSIANSIISGAAEVFNFVSQSMVFIWVLYYLITSESGGVTEQVMHMLPISKSTRVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLYKIHFVYMSTILAFMSPLLPIFPSWLATIPAATQLVLEGRYILAIILSVLHLFLMDYGASEILEDVPGNSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVMIALKDLYAEFVLEEPKDKAKQKTS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1228 661 Pfam AI-2E family transporter 445 640 IPR002549 -
Lja6g1228 661 MobiDBLite consensus disorder prediction 1 20 - -
Lja6g1228 661 MobiDBLite consensus disorder prediction 38 52 - -
Lja6g1228 661 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 655 - -
Lja6g1228 661 PANTHER TRANSMEMBRANE PROTEIN 1 655 IPR002549 -
Lja6g1228 661 MobiDBLite consensus disorder prediction 1 66 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1228 - - gmx:100775952 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1228 6 36106226 36109279 Lja6g1228 6 36106226 36109279 ECH