Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1222 ATGGGGAAGAGGAAAGAGCGTCGTCTTGCCGCTCTCAGCAACACTGGTCGCAGAGTCAAGCTCGATCTTTTCGCGGAACCCTCTGGAGACTTGGGTGGCTCCACTGCACATGGGGATGCGGGAGGAGATACCGATTCACAACACCGTGAAGGGTTATCCAATTCACCCTCTTCTTCAGGTCAACAACCACAGAATCCCCTGCTGTTACTTGGACAATATAGCGATGATGAAGCAGATGATGGATCAAGCAAGGGGCCTAATGATAAGAAGGTAGAGAGCCCCATGCTCAATGAAGAGGCTAAGGATGCACTTGATGAAGGTTCTAATGACTTGAACATCAGTGTCTCTGTAGATACTGTTACTCAGAATAATGAACAACAGAATACAATACAAAATCCAACTTCAGTTGAGGCTGCAGACAGTGAAAAAAATGAGTGTGATGTTGCTTCTGGTAATTTGCAAAATGAAACCGTCTCCAAAGATCAGATGTATGTTTCTGAAAATCTTGATGAACAAGTTGTCACTTCAGGATGGAAGATGGTGATGCATGAGGAGAGTCAACGCTATTATTACTGGAATATTGAAACTGGGGAAACTTCATGGGAAGTACCCCAGGTTTTGGTTCAAGCAGATCAGTTGATTAATGATCCAATTCCTCCTAGTTCTGTCTATGATAAAACAGAGGGTGCTGCTGTTGGTATAGATAATTCCGATGACCTCTCAGCTCAGATGCAGGACACTTCTGCTGCTTGCACAATTGATGGTTCCGTAGAAACCATGGCAACTTCTCATAAAAATATGTGTGGTCATTGGTCCCAAATGAATGGATGTAGTGGTGAATGTACAAATGGAAATAAGGGTTCTGATGATAATGGGAATGAGTTGATAAGGGAAGATGGTTTGGTGGGTTTATCTTATGGTGGAGATTATTCATTTGTTTCTAAGTTTAATGGTGAAGAACAGCAGTTGGAAAATGATTTTCCTTCTTGTCTTGTTAAACAAAGTGAGAGTTTGTTAGAGAGGCTGAAATCACTGAAAAAGTCCCAGGGTAATCTGCAAGGCCAAGACTCGTTGTCGAAGTATATGTTAGAAGTTGAGATTAGGCTCTCCGATTTTAGGTCTCTTGCAACCTATGGATCGTCTTTGCTTCCATTCTGGGTGTACTCTGAAAGGAAGATAAAGCTGCTTGAAAGTTTAATAAATAGTGAATTGTTGCAAACTGTGAAATCTACACATAATGAAGTCGAGGATAAACCAATCCCTGTCTCTGAAGGATTATGTGAGCAACAGAATGGCATGGGACACGAGTCTGTAGTACATCCCAGTGAAATCAGTGGGAACTTTCTTACTTCTGAAGTTTCCAATGGATCTCAGGCTGTTGCTTCAGCCGTTTCAAAAGATGACAATGATAAAATTGCCATGAACGATCAGCATGTTTCCTTGTCCAATTCTCCTGGGAGTCATATGGCAACAGGTTTAGAAGTTAATGCAAAAGTTGAAACAACTATAAATCATGAGGAATCAACCCATAAACAAGAGTATAACGTTGGGGAAGATGTTGATATGGATGTCGACATGGAAGTTGAAGATATGGATTCCTCAGAAAATATGACTGTCATGGACGTGTCAGTTTCAAAGGGTTTTCTGCAAACAGACCAACCAGTTCAGCTGAATCCGCTTGTTGACCAGCATTCTTTGTTGCCTGAGGATGAGTTTGTTGTTCCTCCTCCTCCAGATGATGAGTGGATCCCTCCACCACCCCCTGAAAATGAGCTTGTACCTCCACCACCACCACCAGACGATGATCAGGTGCCCCCTCCTCCTGGTGATCCGCTTGGAACTTCTTATGGAACTCTCCCTTCTTACACAGAGACAGGGCAACCCCTTTCTTATTCTCAATATAATCTATCTTATCCTGGGGCTTCTGCTGAGTATTATGGGCAGGCAACTGTTGAAGTCCCAAGCAGTAATATATATGGACAAATTGTTATGCCACCTGCACAGGTCTACTATACTGCAGTTGCTAATGCGTATAGTGAAAATACTCAAGTAATGATCAATCCAACTGACCCTGTTGCTTATTATGAGGTTCAAGATGGAGCTGGTTCAAAACCCGTACCTGCTATCAATGTTGATGAATCTGGTGGGATTGACAGGGTATCTAGTGATTTTCCATCCACCTTATCAAGCATCCATGCACCTGGAGCTGTTTCTGTTGAGGATGGTGTTTCGTTGCCACCAGTCACTACTGAAACTGCTGCTGACAATACTACCTCATCATTAGTTGCTAAAGCACAAACTAAAGTTGTACGTAGTAGAAAGCGGTCAGTTGCAGTTGGACCGTCATTGAAGTCTAATAAGAAGGTCTCGAGTTTGGTGGACAAATGGAAGGCAGCTAAAGAGGAATTGCTTGAAGAGGAGGAAGAACCTGAGAGTGTGTATGAGGTCTTAGAAAGAAAGCGCCAAAGAGAAATTGAGGAGTGGCGTGCAAAGCAAATTGCAAGTGGAGAGGCAAAAGATAATGCTAATTTTCAGCCTCTTGGTGGTGATTGGCGGGAGAGGGTCAAACGCAAGAGACAACAAGCAGCAAAGGAATCTGTTGGCAAACTGCAAGATGCAATTGGGCACAGCCCGGACCAGCCTGATCTGATTGAACTTTCTAAGGGTCTACCATCTGGTTGGCAGGTTTATTGGGATGAAACCTCAAAGCAGGTTTATTATGGTAACACTACAACATCAGAGACGACATGGACTCGGCCAACAAGATGA 2769 0.4323 MGKRKERRLAALSNTGRRVKLDLFAEPSGDLGGSTAHGDAGGDTDSQHREGLSNSPSSSGQQPQNPLLLLGQYSDDEADDGSSKGPNDKKVESPMLNEEAKDALDEGSNDLNISVSVDTVTQNNEQQNTIQNPTSVEAADSEKNECDVASGNLQNETVSKDQMYVSENLDEQVVTSGWKMVMHEESQRYYYWNIETGETSWEVPQVLVQADQLINDPIPPSSVYDKTEGAAVGIDNSDDLSAQMQDTSAACTIDGSVETMATSHKNMCGHWSQMNGCSGECTNGNKGSDDNGNELIREDGLVGLSYGGDYSFVSKFNGEEQQLENDFPSCLVKQSESLLERLKSLKKSQGNLQGQDSLSKYMLEVEIRLSDFRSLATYGSSLLPFWVYSERKIKLLESLINSELLQTVKSTHNEVEDKPIPVSEGLCEQQNGMGHESVVHPSEISGNFLTSEVSNGSQAVASAVSKDDNDKIAMNDQHVSLSNSPGSHMATGLEVNAKVETTINHEESTHKQEYNVGEDVDMDVDMEVEDMDSSENMTVMDVSVSKGFLQTDQPVQLNPLVDQHSLLPEDEFVVPPPPDDEWIPPPPPENELVPPPPPPDDDQVPPPPGDPLGTSYGTLPSYTETGQPLSYSQYNLSYPGASAEYYGQATVEVPSSNIYGQIVMPPAQVYYTAVANAYSENTQVMINPTDPVAYYEVQDGAGSKPVPAINVDESGGIDRVSSDFPSTLSSIHAPGAVSVEDGVSLPPVTTETAADNTTSSLVAKAQTKVVRSRKRSVAVGPSLKSNKKVSSLVDKWKAAKEELLEEEEEPESVYEVLERKRQREIEEWRAKQIASGEAKDNANFQPLGGDWRERVKRKRQQAAKESVGKLQDAIGHSPDQPDLIELSKGLPSGWQVYWDETSKQVYYGNTTTSETTWTRPTR* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1222 922 MobiDBLite consensus disorder prediction 1 94 - -
Lja6g1222 922 MobiDBLite consensus disorder prediction 850 865 - -
Lja6g1222 922 Pfam WW domain 176 204 IPR001202 GO:0005515
Lja6g1222 922 Pfam WW domain 890 920 IPR001202 GO:0005515
Lja6g1222 922 Gene3D - 166 217 - -
Lja6g1222 922 Gene3D - 885 922 - -
Lja6g1222 922 SUPERFAMILY WW domain 887 921 IPR036020 GO:0005515
Lja6g1222 922 PANTHER OS06G0298400 PROTEIN 1 921 - -
Lja6g1222 922 SMART ww_5 173 206 IPR001202 GO:0005515
Lja6g1222 922 SMART ww_5 889 922 IPR001202 GO:0005515
Lja6g1222 922 CDD WW 176 204 IPR001202 GO:0005515
Lja6g1222 922 MobiDBLite consensus disorder prediction 77 94 - -
Lja6g1222 922 MobiDBLite consensus disorder prediction 571 613 - -
Lja6g1222 922 MobiDBLite consensus disorder prediction 840 882 - -
Lja6g1222 922 ProSitePatterns WW/rsp5/WWP domain signature. 894 920 IPR001202 GO:0005515
Lja6g1222 922 ProSitePatterns WW/rsp5/WWP domain signature. 178 204 IPR001202 GO:0005515
Lja6g1222 922 Coils Coil 786 806 - -
Lja6g1222 922 MobiDBLite consensus disorder prediction 569 624 - -
Lja6g1222 922 ProSiteProfiles WW/rsp5/WWP domain profile. 172 206 IPR001202 GO:0005515
Lja6g1222 922 ProSiteProfiles WW/rsp5/WWP domain profile. 888 922 IPR001202 GO:0005515
Lja6g1222 922 SUPERFAMILY WW domain 171 206 IPR036020 GO:0005515
Lja6g1222 922 MobiDBLite consensus disorder prediction 47 69 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1222 K24774 - lja:Lj0g3v0348739.2 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1222 6 36028164 36035230 Lja6g1222 6 36028164 36035230 ECH