Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1219 ATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTCATCATCAACACGTTCTACTCTAACAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACAAGAGCAAGCTCGATGGACAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGACAGTGGTATCGGCATGACCAAGGCTGATTTGGTGAACAACTTGGGTACAATTGCAAGGTCTGGCACCAAGGAATTCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCCTATCTGGTTGCTGAGAAGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAGTCTCAAGCTGGTGGGTCTTTCACTGTTACCAGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTTGAAGGAGGACCAGCTTGAGTACCTTGAGGAGCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACCCAATTTCTCTGTGGATTGAGAAGACCACTGAGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAGGGTAAAGTGGAGGATGTTGACGAAGAGAAGGAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATGGTCTTTGGTGAACAAGCAGAAGCCTATCTGGATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACAAGAGTCTCACCAATGACTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTTCTCTTTGTACCCAAGAGGGCACCATTTGACCTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACGTGTCTTTATCATGGACAACTGTGAGGAGTTGATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATCTCCCACTGAACATCTCCAGAGAAATGTTGCAGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGTGTGGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATTGGGTATTCATGAGGATTCACAGAACAAGAACAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGATGACCAGCCTCAAGGACTACGTGACCAGGATGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAAGCTGTTGAGAACTCTCCATTCTTAGAGAAGTTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCTATTGATGAATATGCTATTGGTCAACTTAAGGAATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAAGTGAAGACGAGAAGAAGAAGCAAGAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGCGACAAGGTGGAGAAGGTTGTGGTTTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGACCGCCAACATGGAAAGGATCATGAAAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAATGGAGATCAACCCTGAGAACCCCATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAGGATCTTGTCCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAGAATCCACAGAATGTTGAAGCTTGGATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGGAAGCAGATGTTGATGCTGAGGGTTCCAAGATGGAAGAAGTTGATTAA 2097 0.4597 MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDSGEPLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNKNKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLEESEDEKKKQEELKEKFDGLCKVMKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSIDEDAGEADADMPPLEEADVDAEGSKMEEVD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1219 698 Coils Coil 226 256 - -
Lja6g1219 698 SUPERFAMILY HSP90 C-terminal domain 541 662 IPR037196 -
Lja6g1219 698 CDD HATPase_Hsp90-like 14 201 - -
Lja6g1219 698 Gene3D - 261 429 - -
Lja6g1219 698 SUPERFAMILY Ribosomal protein S5 domain 2-like 262 517 IPR020568 -
Lja6g1219 698 Coils Coil 521 541 - -
Lja6g1219 698 MobiDBLite consensus disorder prediction 672 698 - -
Lja6g1219 698 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 1 696 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja6g1219 698 MobiDBLite consensus disorder prediction 214 247 - -
Lja6g1219 698 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 180 IPR003594 -
Lja6g1219 698 Gene3D - 430 516 - -
Lja6g1219 698 PIRSF HSP90_HTPG 1 698 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja6g1219 698 ProSitePatterns Heat shock hsp90 proteins family signature. 25 34 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 5 25 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 169 186 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 26 48 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 118 140 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 187 205 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 93 110 IPR020575 -
Lja6g1219 698 PRINTS 90kDa heat shock protein signature 75 92 IPR020575 -
Lja6g1219 698 Gene3D - 1 227 IPR036890 -
Lja6g1219 698 Hamap Chaperone protein HtpG [htpG]. 2 663 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja6g1219 698 PANTHER HEAT SHOCK PROTEIN 81-2 1 696 - -
Lja6g1219 698 MobiDBLite consensus disorder prediction 216 237 - -
Lja6g1219 698 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 5 212 IPR036890 -
Lja6g1219 698 SMART HKATPase_4 27 181 IPR003594 -
Lja6g1219 698 Pfam Hsp90 protein 183 684 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja6g1219 698 Gene3D - 517 666 IPR037196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1219 Lja-Chr6 35966087 35969312 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1219 K04079 - sind:105176572 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1219 6 35966087 35969312 Lja6g1219 6 35966087 35969312 ECH