Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1194 ATGACGAAGAACTCTCTACAAATAACTACAAGCGGTGGCGGTGCTTATGATGACGATGGGCATGCCAAAAGAACAGGGAATTTAAGAAGTGCTGTAGCTCATATCATCACTGCTGTTATTGGTTCTGGTGTTCTGTCTCTGGCATGGAGTACTTCTAGACTAGGATGGATTGGAGGGCCAGTTGCTTTGCTTTGTTGTGCAATTGCCACCTATATTTCTTCATTCCTCCTCTCGGATTGTTACAGACATCCAGATCCTGTCAGTGGGAAAAGAAACTACTCATACATGGATGCTGTTAGAATCACACTTGGGGAGAGAAGGACATGGCTTGCTGGTTTCCTTCAATTTTTGGTTTTGTATGGGACTAGTATTGCATATGTGCTCACAACAGCTACTAGTCTGAGTGCTATTCTGAGATCAAATTGTTATCACGAGAAAGGGCATCAAGCTCCTTGTAGTTATGGGGGTAATTTGTATATGGTGCTGTTTGGACTTGTTCAGATTGTAATGTCATTCATACCAGATCTCCACAACATGGCATGGCTTTCGGTTCTTGCTGCAATTATGTCCTTTACATACTCGTTCATTGGACTAGGACTTGGCATAGCAACAGTCATAAAAAATGGAAGAATTATGGGGAGTGTGACAGGAGTACCAGCTGCTAATGTTGCTGATAAAATCTGGTCAATTTTCCAAGCACTTGGGGACGTTTCCTTTTCCTATCCATACGCAATTCTCTTTCTCGAGATACAGGACACTCTAGAGTCCCCTCCACCAGAGAATCAAACAATGAAAAAGGCCTCCATGATGGCAATCTTCATCACAACATTCTTCTATCTCTGCTGTGGATGCTTTGGATATGCTGCTTTTGGAAATGCTACACCAGGGAACCTCTTGACTGGGTTTGGATTTTATGAGCCTTTCTGGCTTATTGACCTTGCGAATGCTTGCATTATGGTTCATTTGGTGGGAAGTTATCAGATCTACAGTCAACCAATATATGGTACTGCTGATAGATGGTGTTCAAAAAAACTCCCCAACAGTGACTTTGTGAACAAATTCTACAGAGTGAAACTGCCTCTATTGCCAAGTTTTGAACTGAATCTTTTCAGAATATGTTTCAGAACAGTCTATGTGATTTCAACCGTTGGACTCGCAATCGCGTTTCCTTACTTCAACCAAATTCTTGGAGTGCTGGGAGCCATAAACTTCTGGCCAATGGCTATATATTTCCCAGTGGAGATGTACTTTGTGCAGAACAAAGTTGGAGCTTGGACTAGAAAATGGATTGTTCTCAGGATATTCAGCTTTGCTTGCTTTCTTGTGACACTAATGGGGTTGGTTGGATCACTTGAAGGAATCATACATGAGAAACTTAAATAG 1383 0.4187 MTKNSLQITTSGGGAYDDDGHAKRTGNLRSAVAHIITAVIGSGVLSLAWSTSRLGWIGGPVALLCCAIATYISSFLLSDCYRHPDPVSGKRNYSYMDAVRITLGERRTWLAGFLQFLVLYGTSIAYVLTTATSLSAILRSNCYHEKGHQAPCSYGGNLYMVLFGLVQIVMSFIPDLHNMAWLSVLAAIMSFTYSFIGLGLGIATVIKNGRIMGSVTGVPAANVADKIWSIFQALGDVSFSYPYAILFLEIQDTLESPPPENQTMKKASMMAIFITTFFYLCCGCFGYAAFGNATPGNLLTGFGFYEPFWLIDLANACIMVHLVGSYQIYSQPIYGTADRWCSKKLPNSDFVNKFYRVKLPLLPSFELNLFRICFRTVYVISTVGLAIAFPYFNQILGVLGAINFWPMAIYFPVEMYFVQNKVGAWTRKWIVLRIFSFACFLVTLMGLVGSLEGIIHEKLK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1194 460 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
Lja6g1194 460 PANTHER OS05G0424000 PROTEIN-RELATED 4 459 - -
Lja6g1194 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1194 Lja-Chr6 35410712 35415156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1194 5 442 Organic Solute Cotransporters AT1G77380 51.701 3.88e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1194 K24917 - gmx:100781077 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1194 6 35410712 35415156 Lja6g1194 6 35410712 35415156 ECH
Lja6g1193 6 35352304 35355456 Lja6g1194 6 35410712 35415156 PCT
Lja6g1194 6 35410712 35415156 Lja6g1194 6 35410712 35415156 PCT