Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1192 ATGGATTTGAAAAACTCTCTCCTAATAACTACAACTGCTTCTGGTGCTTACGATGATGATGGGAGAGCAAAAAGGACTGGGACTTTAAGAAGTGCTGTGGCTCATATCATCACTGCTGTCATTGGTTCTGGTGTTCTGTCTCTTGCCTGGAGTACTTCTCAACTAGGATGGATTGGTGGGCCAGTTGCTTTGCTTTGCTTTGCAATTGTCACCTATGTTTCTTCATTCCTCATGTCTGATTGTTATAGATACCCTGATCCTGTCACTGGGAAAAGAAACTACTCATACATAGCTGCTGTTAGAGCCAATCTTGGTGAGAGAAGAACATGGCTGGCTGGTTTCCTTCAATTTTTGACCTTGTATGGAACTAATATCGCTTATGTACTCACAACAGCAAATAGTCTCAGAGCCATTCTGAAATCAAATTGTTATCACAAGGAAGGGCACCAGGCTCCTTGTAATTATGGGGGTAGTTTGTATATGGTGTTGTATGGACTTGTTCAGATTCTAGTGTCATGCATTCCAGATCTCCAAAACATGGCATGGCTTTCAGTTGTTGCTGCAATTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCAACTGTCATAGAAAATGGAAGAATTATGGGGAGCCTAACTGGAGTACCAGCTGCTAATATTGGTGACAAGTTATGGTTAGTCTTCCAAGCACTTGGTGACATAGCCTATGCCTACCCTTACTCAATAATCCTTCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAATCAAACGATGAAAAAGGCCTCCATGATTTCAATCATCATTACAACATTCTTCTACCTCTGTTGCGGAGGCTTTGGATATGCTGCTTTTGGAAATGCTACCCCAGGAAACCTCTTGACTGGATTTGGGTTTTACGAGCCTTACTGGCTGGTGGACCTTGCCAATGCTTGCATTATTCTTCACTTGGTGGGAGGATATCAGATTTTCTGCCAGCCAATATATAGTGTTGTTGAAAGATGGGCTTCAAGAAAATTTCCCGACAGTGACTTTGTGAATAATTTCTATAAACTGAAACTGCCTCTTTTGCCAAGTTTTCAGCTGAATATGTTCAGGTTCTGTTTCCGAACAATCTATGTGATTTCAACCACAGGAGTTGCAATCTTGTTCCCTTACTTCAACCAAGTATTAGGAGTGTTAGGAGCCATAAGCTTCTGGCCATTGAATATATATTTTCCGGTGGAGATGTACTCTGCGCAGAAGCAAGTTGGTCATTGGACAAGAAAATGGGTTGTTCTCAAGGCATTTAGCTTTGCTTGCTTTCTTGTCACAGTAGTGGGCCTCATCGGGTCACTTGAAGGAATCATAAAAGAAAAACTTGGATGA 1386 0.4177 MDLKNSLLITTTASGAYDDDGRAKRTGTLRSAVAHIITAVIGSGVLSLAWSTSQLGWIGGPVALLCFAIVTYVSSFLMSDCYRYPDPVTGKRNYSYIAAVRANLGERRTWLAGFLQFLTLYGTNIAYVLTTANSLRAILKSNCYHKEGHQAPCNYGGSLYMVLYGLVQILVSCIPDLQNMAWLSVVAAIMSFTYSFIGLGLGIATVIENGRIMGSLTGVPAANIGDKLWLVFQALGDIAYAYPYSIILLEIQDTLESPPPENQTMKKASMISIIITTFFYLCCGGFGYAAFGNATPGNLLTGFGFYEPYWLVDLANACIILHLVGGYQIFCQPIYSVVERWASRKFPDSDFVNNFYKLKLPLLPSFQLNMFRFCFRTIYVISTTGVAILFPYFNQVLGVLGAISFWPLNIYFPVEMYSAQKQVGHWTRKWVVLKAFSFACFLVTVVGLIGSLEGIIKEKLG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1192 461 PANTHER AMINO ACID PERMEASE 7-RELATED 15 459 - -
Lja6g1192 461 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Lja6g1192 461 PANTHER OS05G0424000 PROTEIN-RELATED 15 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1192 Lja-Chr6 35344928 35350821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1192 11 443 Organic Solute Cotransporters AT1G77380 54.943 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1192 K24917 - gmx:100816934 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1192 6 35344928 35350821 Lja6g1192 6 35344928 35350821 ECH