Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1188 ATGCATCTCTACAATGCATGGCTTCCACCGCCTGTGGCGGCTCAGACCGCCGCCGAGAGAGACTCGTTCGCTCGCCTCATCGCCACCGTCAACTCTTCCTTCACCCGCGATGATCCTGAATCCGTCTTCTCCACTCTCAAATACGTCTCCGTCCTTGACCTTTTCATAAAGGCGAAAAGTGATGTTTCCTTGGAAGATGTCCGCACCCTTATTCAAATGGGACTGGAACTATTTCATATGTCCCGTAGCAAGCTTTATGCCCAGGTTAGATGGGGAAATTTATTAATCAGACTACTCAACAAGTATAGGAAAAAGGTTGCACTGACTATTGAGTGGAGGCCTCTGTATGATACACTGGTTAGCACACATTTTACCAGAAATACTGGTCCAGAAGGTTGGAGAGTAAGACAACGTCATTTTGAAACTATAACTTCCCTTGTTCAATCCTGCCGGAGATTCTTTCCATCTGGTTCCGCCTTTGAGATATGGTCCGAGTTTAAATCTTTATTGCAAAACCCATGGCATAATTCGTCCTTTGAAGGATCTGGTTTTGCAAGACTGTTTCTACCAACAAATTCAGACAACCAGGACTTTTATACACATGATTGGATAACAGAGTGTATAGATTTGTGGGGATCTATACCAAATTGTCAATTCTGGAACAATCAATGGGCAGATGTTGTAGCTCGTGTTGTAAAAAGTTACCACAATGTTGACTGGGAGTGCTTCTTGCCTCTGCTTTTTGCTAGATACCTCAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCTTTTTCATTGGATGTCCCAAGAAACACAAGATTTTTGTTCTCCAATAGAACTTCCACCCCTGCAAAGGCCATTGCCAAATCAATTGTCTATTTACTAAAACCTGGTAATTCAGCACAGCAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGATGGACTTACTCATTGGATCGCTTCTTGTTTCATTTGGTGATTCAATTTCAGAAGCGTCTACAGAACGAGCAATTGGGAACAAATAATAGCAAACCCACTGAACAGCATCTTGCGGAATCAGATAGGGCTTTCTTTGTTAATTTAGTGCTAAAATTAATTGATCGTGGTCAATACAGCAAGAATGAGCATCTCTCTGAGACAGTTGCTGCAGCAACTTCTGTATTGTCTTATGTGGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCGTATGGCCCTTGAGACGATGACTGCCACCCACCAGTTGAAAGTTGCAGTCATGTCAGTGGCATTTGTTGGGCGTTCACTATTTTATACATCCATATCGGCTTCCTCCATGAAACCAGTGGATCTTGGTGGTGGTGATGAAACATTCATTGATCTTGTGGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCTTGGCTACGATGCAATTAATTGGTTCCGTTTTTTCAAATTTGGCTTTATTGGATGATAAGATTGATGACTTAACATTAATGCCGATGATCCGCTTTTCTGAATGGTTGGATGAGTTCTTTTGCCGTCTGTTTTCTCTACTTCTACACTTGGAACCCAGCAGTGTTATAAATGAAGGTCTGCACTCATCAGCATCATCAGGAACTTTTCTAGTTGATGATGGTCCATATTACTTCTGTCTACTTGAAGTTCTTCTTGGGAGGCTTTCAAAACCACTGTATAATCAGGCGTTGAAGAAAATTTCCAAGTTTGTTAGGACAAACATTCTTCCTGGTGCTATTGCAGAGGTTGGACTACTCTGTTGTGCATGCATTCACTCGAACCCAGAAGAAGCAGTCAGTCAACTTGTTGAGCCAATATTAGCGTCTGTGATATCCTCTTTGAAAGAAACACCACGCACTGGATTTGGAGGAGGAAGTTTTGATGCTTCTGTTTCAACCAAGGTTAGATCGACCATTTCACCTGCTCTTGAGGCTGCAATTGACTATCAACTAAAGATATTATCAGTTGGAATCACATATGGAGGTCCAGCGCTCCTCCGGTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGACTCGCCATCGTGGAAGGTTAATGGGGCCGCTGATCATCTTCTGCGATCCGTTCTTGGAAGTCAGATTCATTATTATCCAATTGACCAGTATAAGTGTGTTTTTAGTCACCCTGATGCTGTTGCTCTAGAACAATGGATTAGCATGAAAGATTTTTCCACGGATGAGAGGTTGATCCCAAAGTGGCATGTTCCTAATGATGAAGAAATTCAGTTTGCGAATGAGCTTTTAGACATTCACTTTAAGTCAGCTTTGGATGACCTGTTGAAAATATGCCAAACAAAAATCCATGCTGATCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGTGTCGAGTCAACATTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTCCCAGAATCTAGGAATGGAATGGTTGAAGATTCAAACCTTACATTTCTAATTGCTGGGGCAACAGGTTGTACTATTGGTAGCACTGCTCTTCGAGAAAAAGCTACTGAGGTTATTCATGCAGCATGCAAATATATTCTTGAGAAAAAATCAGACGACAGCATCCTGTTGATACTCGTTATTCGTATTATTGATGCCTTAGGAAACTATGGAAGTTTGGAATATGATGAGTGGTATAGTCACAGGCAGGCTTGGAAGTTGGAATCTGCTGCCATCATCGAACCCCCAATTAATTTCATTGTGTCAACTCATTCTAAAGGAAAAAAACGACCTTGGTGGGCTCTTATCGACAAGGCATTCATGCACAATACCTGGAGGTCTTCTCAAGCATCTTATCATCTTTACCGTACAAGTGGGAATTTCTGTCCATCAAATCACGTGACTATGTTGATGGATGATTTGTTGAGTCTCTGTTTACATAGCTATGAAACTGTCCGCCTACTTGCTGGGAAAGCTCTAGTGAAGCTGATCAAGAGATGGCCATCAACGATTTCAAAATGTGTGATTACCCTTGCTAATAACTTACAAGAGCCCAACCCCAAGGAATGTGAAGTGTTGGGTTCTTGTTCAGTCCTTGCCTCACAGACAGTTCTCAAGCATTTGACAACGGATCCAAAGTCATTCTCATCATTTATCTTGGCAATTCTTTCAAGTTCTCATCATGAATCCTTGAAATCTCAGAAAGCAATTAACGAGCTTTTTGTGAAGTACAACATCTATTTTTCTGGAGTATCTAGGAGCTTTTTTAGGATTTCAGAGAAAGATAATCATACTGGTGGACTGGGTTTTTCAGATTTGGTTTCTCAGATTGGCTCTCTGAGTTTTGAATCTACTGGCTTGCATTGGCGGTACAATTTGATGGCTAACAGAGTTCTGCTCCTTCTTGCTCTGGCGTCTCGGAACCACCCAAGTTCATCATCTAAAATCCTGAGTGAAACTGCTGGACACTTCTTGAAGAATTTGAAAAGTCAACTACCTCAGACACGGATACTTGCAATTTCAGCTCTGAATACGTTGTTAAAGGAATCACCTTATAAGCTGTCTCCTGGTGAGAAATCTGCTGTAGTTGAGGATTTGCAAGGCAATATCAAGTCATCCCTTGAAGGAACTTTAACTCAAACTTTTGAGGAAGAGGGTTTCTTCAATGAGACCCTCACTAGTCTTTCTCATGTTCATATAATAACTGATAGTGAAAGTGCTTCAAGGGGAAATCATGGAGATTCCAGTTTCCAAAGTTTAGCAGACAAATCTATAACCCGTTTTTATTTTGAATTTTCGGCTTCATGGCCACGTACACCAAGTTGGATCTCCTTTTTAGGAAATGATATATTCTACTCAAGTTTTGCTCGTATTTTCAAGCGGCTAGTACAAGAATGTGGCATGCCTGTAGTATTGGCTCTTAAAGGTGCAGTAGATGAGTTTACAATTGCCAAGGAGAGGTCTAAACAATGTGTAGCCGCTGAAGCATTGGCAGGCGTGTTACATTCTGATATTGATGGTCTATCTGGAGCATGGGAAAGCTGGCTGATGCCCCAGTTGAAGAATATCATTCTCACACAGTCTGTTGAATCAGTTCCTGAGTGGGCCTCTTGCATAAGATATGCAGTTACTGGTAAAGGAAAGTACGGAACAAGAGTTCCTCTTTTGAGGCAGAAAATTCTAGATTCATTGATGGAACCTTTACCTCCAACAGTACCTACCACCGTAACAGCCAAGCGATATGCTTTTCTGGCTGCTGCACTTATAGAAATTTCTCCACAAAGAATGCCAGTAGCTGAAATCCAGCTTCACAATACACTTCTGAAGGAGGTCCTTGGTAATATGTGCCACTCATCAGCCCAAGTGAGGGAGGCTCTAGGGGTTACCCTTTCTGTATTGTTCTCTAACATTCGGCTATGTCATTCAAGTTATAATGCTAATGCATGTGATGAGAGAAACAACAATGTTGATAGTTTGATGGAAGATAAAAGCTGGGTTAAGTTTCTGACAGAGCGAGCAGCTGAAGCAGTTGTGAACATTCAGACTGCAACCCAATCAGATAAAGCGGTGAATCCCATGGATACAAGTTCACAAAATGGGCATTTAGATGGTGATTCACAAGATGATATGAAATGGATGGAAACGCTACTCCACTTCATCATCTCATCATTGAAGTCTGGGAGATCCTCCTATCTACTTGACGTAATTGTGGGGCTTCTTTATCCTGTGATTTCCTTGCAGGAAACTTCAAATAAGGATCTGTCGACATTAGCCAAGGCTGCATTTGAATTGCTAAAATGGATGGTCGTTTGGGAACCTCACCTCCAGAAGGCCATATCTGTGATTCTTTCTGCGGCTAATGATTCCAATTGGCGAACTCGGTCTGCCACATTGACATATCTGCGTACTTTCATGTACAGGCACACTTTCATTCTCTCAAGTTCAAAGAAACAAGAAATTTGGAGTACGGTCGAGAAGTTACTAATAGACAACCAAGTTGAGGTACGAGAACATGCTGCAGCAGTTTTAGCAGGTTTAATGAAGGGTGGAGATGAGGATCTAGCTAAAGATTTCCGTGATAGAGCTTATTTGGAAGCAAATAGTGTACACAGGAGAAGAAAATTGAGAAATGCAAGTTCTGGTCCATCTGTAGCATCTGTTCATGGTGCTGTACTAGCTTTGGCAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGTTGGTTGCCCGAGCATATTACACTGCTAGCTCGCTTTAGTGGGGAGCCATCTCCTGTGAAATCTACAGTGACAAAAGCAGTTGCTGAGTTCCGGCGGACACATGCTGATACATGGAATGTTCAGAAGGAGTTATTTACTGAAGAGCAACTTGAGATTCTGGCAGATACATCCTCTTCATCATCGTACTTTGCGTGA 5448 0.418 MHLYNAWLPPPVAAQTAAERDSFARLIATVNSSFTRDDPESVFSTLKYVSVLDLFIKAKSDVSLEDVRTLIQMGLELFHMSRSKLYAQVRWGNLLIRLLNKYRKKVALTIEWRPLYDTLVSTHFTRNTGPEGWRVRQRHFETITSLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNSDNQDFYTHDWITECIDLWGSIPNCQFWNNQWADVVARVVKSYHNVDWECFLPLLFARYLNMFEVPVANGSGSYPFSLDVPRNTRFLFSNRTSTPAKAIAKSIVYLLKPGNSAQQHFEKLVNILEQYYHPSNGGRWTYSLDRFLFHLVIQFQKRLQNEQLGTNNSKPTEQHLAESDRAFFVNLVLKLIDRGQYSKNEHLSETVAAATSVLSYVEPSLVLPFVASRFRMALETMTATHQLKVAVMSVAFVGRSLFYTSISASSMKPVDLGGGDETFIDLVGVSLSNALLGMDANDPPKTLATMQLIGSVFSNLALLDDKIDDLTLMPMIRFSEWLDEFFCRLFSLLLHLEPSSVINEGLHSSASSGTFLVDDGPYYFCLLEVLLGRLSKPLYNQALKKISKFVRTNILPGAIAEVGLLCCACIHSNPEEAVSQLVEPILASVISSLKETPRTGFGGGSFDASVSTKVRSTISPALEAAIDYQLKILSVGITYGGPALLRYKDQFKEAIFLAFDSPSWKVNGAADHLLRSVLGSQIHYYPIDQYKCVFSHPDAVALEQWISMKDFSTDERLIPKWHVPNDEEIQFANELLDIHFKSALDDLLKICQTKIHADQGDEKEHLKVTLLRVESTLQGLFSCLPDFVPESRNGMVEDSNLTFLIAGATGCTIGSTALREKATEVIHAACKYILEKKSDDSILLILVIRIIDALGNYGSLEYDEWYSHRQAWKLESAAIIEPPINFIVSTHSKGKKRPWWALIDKAFMHNTWRSSQASYHLYRTSGNFCPSNHVTMLMDDLLSLCLHSYETVRLLAGKALVKLIKRWPSTISKCVITLANNLQEPNPKECEVLGSCSVLASQTVLKHLTTDPKSFSSFILAILSSSHHESLKSQKAINELFVKYNIYFSGVSRSFFRISEKDNHTGGLGFSDLVSQIGSLSFESTGLHWRYNLMANRVLLLLALASRNHPSSSSKILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSPGEKSAVVEDLQGNIKSSLEGTLTQTFEEEGFFNETLTSLSHVHIITDSESASRGNHGDSSFQSLADKSITRFYFEFSASWPRTPSWISFLGNDIFYSSFARIFKRLVQECGMPVVLALKGAVDEFTIAKERSKQCVAAEALAGVLHSDIDGLSGAWESWLMPQLKNIILTQSVESVPEWASCIRYAVTGKGKYGTRVPLLRQKILDSLMEPLPPTVPTTVTAKRYAFLAAALIEISPQRMPVAEIQLHNTLLKEVLGNMCHSSAQVREALGVTLSVLFSNIRLCHSSYNANACDERNNNVDSLMEDKSWVKFLTERAAEAVVNIQTATQSDKAVNPMDTSSQNGHLDGDSQDDMKWMETLLHFIISSLKSGRSSYLLDVIVGLLYPVISLQETSNKDLSTLAKAAFELLKWMVVWEPHLQKAISVILSAANDSNWRTRSATLTYLRTFMYRHTFILSSSKKQEIWSTVEKLLIDNQVEVREHAAAVLAGLMKGGDEDLAKDFRDRAYLEANSVHRRRKLRNASSGPSVASVHGAVLALAASVLSAPYDMPSWLPEHITLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA* 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1188 1815 SUPERFAMILY ARM repeat 291 1086 IPR016024 -
Lja6g1188 1815 Pfam Proteasome-substrate-size regulator, mid region 519 824 IPR032430 -
Lja6g1188 1815 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Lja6g1188 1815 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1815 - -
Lja6g1188 1815 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1815 IPR035309 GO:0016504|GO:0070577|GO:0070628
Lja6g1188 1815 SUPERFAMILY ARM repeat 959 1698 IPR016024 -
Lja6g1188 1815 Pfam Domain of unknown function (DUF3437) 1730 1815 IPR021843 -
Lja6g1188 1815 Gene3D - 1554 1706 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1188 K06699 - gmx:100814812 3266.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1188 6 35128972 35153182 Lja6g1188 6 35128972 35153182 ECH