Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1072 ATGGAGAAAACCAACTTCCTTCTCTTGCTCCTCCTTCAAAGCCTCTTCATAGACGAACCCACCACCACAAAACCCAAACCCTCTATTTTCCACCGAGTCACGCTCGCCAACTCGCTCCTCCGAGCCTGGGCAACTCAGCCCAAACTCAGCCATTCCCCCACCTCACCGCCACCCAATGACCCACGCGCCTCCGTCCCCTGTTCGGAGCAGCGCGTGGTGGTCTACTTCACCAGCCTGCGCGTCGTACGAACCACATTCGAGGACTGCAAAACGGTGCGTTCCATCCTGCGCGGGTTCCGGGTCGCGCTGGACGAGCGAGACGTGTCCATGGACTCGGGTTTTCTCACGGAGCTCCAGCGAGTCACGGGTCGGAAAACCGGGTTGACCCTGCCCGGAGTTTTCATCAACGGTAGGTACGTTGGTGGGGCCGAGGAGGTGAGGTGGCTGCACGAGAGTGGCGAGCTTAGGAAGCTTCTTGAAGGGTTGCCCGCAGTGGATTCTCATCTCCGCGCGTGCCACGTGTGCGGTGATCATAGGTTCGTGCTCTGTGGGGAGTGCTCCGGTGCGCGCAAGGTGTACGCGGAGAAAGGTGGGTTCAAGACGTGTACGGCTTGCAATGAGAGTGGGTTAATCAGTTAA 639 0.5915 MEKTNFLLLLLLQSLFIDEPTTTKPKPSIFHRVTLANSLLRAWATQPKLSHSPTSPPPNDPRASVPCSEQRVVVYFTSLRVVRTTFEDCKTVRSILRGFRVALDERDVSMDSGFLTELQRVTGRKTGLTLPGVFINGRYVGGAEEVRWLHESGELRKLLEGLPAVDSHLRACHVCGDHRFVLCGECSGARKVYAEKGGFKTCTACNESGLIS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1072 212 ProSiteProfiles Glutaredoxin domain profile. 60 166 - -
Lja6g1072 212 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 12 211 - -
Lja6g1072 212 CDD GRX_GRX_like 71 211 - -
Lja6g1072 212 Gene3D Glutaredoxin 66 161 - -
Lja6g1072 212 SUPERFAMILY Thioredoxin-like 67 163 IPR036249 -
Lja6g1072 212 Pfam Glutaredoxin 73 140 IPR002109 -
Lja6g1072 212 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 12 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1072 Lja-Chr6 25961084 25963851 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1072 K17479 - gmx:100805215 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1072 6 25961084 25963851 Lja6g1072 6 25961084 25963851 ECH
Lja6g1072 6 25961084 25963851 Lja6g0365 6 9265983 9266711 ECH
Lja6g1072 6 25961084 25963851 Lja6g1072 6 25961084 25963851 PCT