Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0979 ATGAAGCACTTCATGCTCCCAAGAACCCCAATCTTGAGGGACGCAGAGAGCCCTAGCAGCTCCTCCAAACCCAGACCCTCCCGTAAGCACCACCACCACAAACCCTCCAAAGAAAACGACCCTCCGATCTCAGATCCCAATGTCGCCGCTGCCGTCGCCGCAATCCATTCCCCTGCCAAATTGAAGAGCCCCTTGCCTCCTCGCCCTCCCCCTTCCAACCCTCTCAAACGCAAGCTCTCCGCCGACAACACCACCACCCTCACCGACAACAACGCCGCCGTACTCTCCGATTCCGGCGTTAAGGTTGTTGTGAGGATGAGGCCACTGTGCAAGGATAAGGACGAAGGAGATCCCATTGTTGAGAAGATTTCCACTGATTCCTTGTCCTTCAATGGCCAGACTTTCACCTTCGATTCCGTCGCTGACATGGAGGCTACCCAGCTCGATATTTTCGACCATGTTGGGGTGCCTTTGGTAGAGAATTGCTTGGCTGGTTTCAATAGTTCAGTGTTTGCTTATGGACAGACGGGGAGTGGGAAGACTTATACAATGTGGGGTCCTTCGAATTCCTTGTCCGAAGAAAATGTAGCAAGAGATCAGCAAGGCCTTACACCCCGTGTGTTTGAGCTACTCTTTGCACGTTTAAATGAAGAGCAAACTAAGCATTCTGACAAGCAGCTCATGTATCAGTGCCAGTGTTCTTTTCTTGAGATATACAATGAGCAAATCACAGATTTGTTGGATCCGAATCAGAGAAACCTACAGATTAGAGAAGATGTCAAATCTGGTGTATATGTTGAAAATCTTACAGAGGAGCAAGTGTCTACTATGAAGGATGTAACTCAGCTTTTAATAAAGGGATTATCAAACAGGAGAATTGGCGCAACCAGTATAAATTCTGAGAGTTCCCGCTCCCACACTGTTTTTACTTGTGTTGTTGAATCTCAATACAAGAGCACAGCAGATGGTATGAGCAGATTTAAAACAAGTAGAATCAATCTTGTCGATCTAGCTGGATCAGAACGTCAAAAACTAACAGGTGCAGCAGGAGAACGTTTGAAGGAAGCTGGCAATATCAATAGATCACTCTCACAGCTAGGGAATTTGATAAATATTCTTGCAGAAGTCTCTCAAAAAGGAAGACAGCGGCATATACCATATAGAGATTCCAAGTTGACATTTTTGTTGCAGGAGTCTCTTGGAGGAAATGCAAAATTGGCCATGGTTTGTGCTATCTCACCAGCACAAAGTTGTAGGAGTGAAACTTTCAGTACATTGCGATTTGCACAGCGTGCCAAAGCTATCAAGAACAAGGCAGTTGTTAATGAAGTTATGGAGAATGATGTGAATCAGTTGCGACAAGTGATACGACAACTAAGGGATGAACTGCATCGAATAAAAGCAAATGGGTACAATCCATTGGACTCAACTGGAGGTCATTCAGCAGCTTGGATCCGAAGGAGCTTGAATTTGTTACAGTCTAGCCTGAAGAGACCATCTCCACTATCCCGTGTTGATGATGATGGTGATGAGGAGATGGAGATTGACGAGGAAGGTATTGAGGACTACGATGGAGTTTCCTGCAATGCCAATATGCTGAATAATCGTAACATGGTAGCAGAAAATGACAATGGAATGAACACTGATGATCAAGATTTAGCTCAATCAAAGGAGAAACATACTCCTGGTTTCTTTGACAGTAAATGTTTAAATGAAGAATCACCAGGCGGCGTGGTACAAAGCAGTTTCTCTTCTGCTGTGGGTGAATCTGACATTGGAGATTTTGCTGGGTTCTCAGCCCCAAATGCGTCAACTGATTCTCCCAGTGCCACGGTGAGTTGTGTCTCTCCTGCTGGCCTCAACATAGATAAGGATGCTTTATCCCCAGTCCTTAAATCTCCAACTCCTAGTGTTTCTCCTAGAATCAGCACCAGCAGGAAAAGTTTGAGGACATCCTCAGGGCTGTCTCCTTCCGATGATATTCATGCTGAAAGTGATTTGGGTATAAGCACTGGCAACCAGAGAAGCTCATCTAATGCCCTTTCTAGTCAGACAGCTCCAAATTTCCTTACAAAAACAGAAAACTTAGCCGCAAGCATACGTCATGGTCTTGAAATTATTGATAGTCACAATCGCAATCCAGCTTTGAGGTGGTCATCATATAGATTTTCATTACGACCAAGAGAATCCAAACTAATCCTTCCAGTTGACAAAGTTGATGTGGGTGTACAGACTTTTCTTGATGATAATAGGGTTGAAGAAGATTCTGCTTTGTTTACATGTAGTAGTTGTCAAACCAGAGCGCAACTTGATGTCATTGACAATAACTCAAACCTACAGCTAGTACCGTTTGATTGCCCTGAGTCTGCTGATAAGCCAATGAAGCAAGTTCTCAAAGAAATCGAAAAGGTTTTGGCAGGATCGATAAGGAGAGAAATGGAACTTGAAGAGTTCTGTGCGAAGCAGACTTCTGAGATAATGCAGCTTAATCGCTTGGTGCAACAGTGCAAGCATGAGAGGGAATGCAATGCCATAATTGCACAGACAAGGGAAGATAAAATTCTTCGCCTTGAGAGCCTTATGCATGATTTATTACCCAATAAGGAGTTCCTGGATGAGGAGCTGGTGGCCCTTACTCATGAACACAAGCTTTTAAAGGAGAAGTACGAGAATCATCCAGAAGTTTCGAAGATGGAGTTAGAGTTAAAAAGGGTACGAGATGAACTAGAAGAGTATCAAAATTTCTACAAATTGGGGGAGAGGGAAGTATTGATGGAAGAGATACAGACTTTAAGGAGCCAGCTTCAATTCTATATTGACTCTTCATCTACGGCAGCAAGGAAGCAATATCCTTTATTGCAATTGACTTATCCATCTCAACCCAGTTTGGCATCAACTCTCAATGCCATTCCAGAGTCAACAGAGGAGAGGGATGAGACCCATGAAATTCCAGCATCAACCAAGGACAGTGCTGAACTAAAACTTGAACAAGAAAGAATTAGATGGACTGAGGCAGAAAGCAGGTGGATTTCTCTTTCTGAAGAACTGAGAGCTGAGCTTGAAGCTAACAGGTCGCTAGCTGAAAAGAGGAAGCGAGAATTAGATGCTGAAAGGAAGTGTACTGAGGAACTTCACGATGCCATGCGGGTGGCTATAGAAGGTCATGCACGGATTTTAGAACAGTATGCAGATTTGGAAGAGAATCATATCCAGCTGCTTGCAAGGCATAGAAAAATCCAGGATGGAATTGAGGATGTCAAGAAAGCAGCTTCCAGAGCAGGAGTAAGAGGTGCAGAGTCTAGATTCATAAATGCCCTTGCTGCAGAAATTTCAGCATTAAAAGCAGAAAGAGATAAAGAAAGGAGAATGTTAAGGGATGAAAATAGAGGGCTTCAGGCCCAATTGAATGATACAGCGGAAGCAGTGCAAGCTGCGGGTGAATTGCTTTGCCGGCTTAAAGAAGCTGAAGAAGCTGTCACTACTGCACAGAAACGGGCTATGGATGCAGAGCTGGAAGCTGCTAAGGCCTACAAACAAGTTGACAAGTTAAAGAAGAAACATGAGAAGGAGATTACCTCACTTAATGAGCTTCTGGTAGAAGCACGTTTGCCGAAGGAATCAGTACAACCGACTTATGATGATGATGTGGTCATGCCCACATTTGATGATGACTCAAAGGAGCTACACAGTATTAATGGCGAGGACGGTGAGCTTGCGAAACTAGCAGAACCGTCGTGGTTCTCTGGGTATGACAGATGCAATATATAG 3768 0.4413 MKHFMLPRTPILRDAESPSSSSKPRPSRKHHHHKPSKENDPPISDPNVAAAVAAIHSPAKLKSPLPPRPPPSNPLKRKLSADNTTTLTDNNAAVLSDSGVKVVVRMRPLCKDKDEGDPIVEKISTDSLSFNGQTFTFDSVADMEATQLDIFDHVGVPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPSNSLSEENVARDQQGLTPRVFELLFARLNEEQTKHSDKQLMYQCQCSFLEIYNEQITDLLDPNQRNLQIREDVKSGVYVENLTEEQVSTMKDVTQLLIKGLSNRRIGATSINSESSRSHTVFTCVVESQYKSTADGMSRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQKGRQRHIPYRDSKLTFLLQESLGGNAKLAMVCAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMENDVNQLRQVIRQLRDELHRIKANGYNPLDSTGGHSAAWIRRSLNLLQSSLKRPSPLSRVDDDGDEEMEIDEEGIEDYDGVSCNANMLNNRNMVAENDNGMNTDDQDLAQSKEKHTPGFFDSKCLNEESPGGVVQSSFSSAVGESDIGDFAGFSAPNASTDSPSATVSCVSPAGLNIDKDALSPVLKSPTPSVSPRISTSRKSLRTSSGLSPSDDIHAESDLGISTGNQRSSSNALSSQTAPNFLTKTENLAASIRHGLEIIDSHNRNPALRWSSYRFSLRPRESKLILPVDKVDVGVQTFLDDNRVEEDSALFTCSSCQTRAQLDVIDNNSNLQLVPFDCPESADKPMKQVLKEIEKVLAGSIRREMELEEFCAKQTSEIMQLNRLVQQCKHERECNAIIAQTREDKILRLESLMHDLLPNKEFLDEELVALTHEHKLLKEKYENHPEVSKMELELKRVRDELEEYQNFYKLGEREVLMEEIQTLRSQLQFYIDSSSTAARKQYPLLQLTYPSQPSLASTLNAIPESTEERDETHEIPASTKDSAELKLEQERIRWTEAESRWISLSEELRAELEANRSLAEKRKRELDAERKCTEELHDAMRVAIEGHARILEQYADLEENHIQLLARHRKIQDGIEDVKKAASRAGVRGAESRFINALAAEISALKAERDKERRMLRDENRGLQAQLNDTAEAVQAAGELLCRLKEAEEAVTTAQKRAMDAELEAAKAYKQVDKLKKKHEKEITSLNELLVEARLPKESVQPTYDDDVVMPTFDDDSKELHSINGEDGELAKLAEPSWFSGYDRCNI* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0979 1255 PANTHER CENTROMERE PROTEIN E 65 523 - -
Lja6g0979 1255 PRINTS Kinesin heavy chain signature 165 186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 PRINTS Kinesin heavy chain signature 331 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 PRINTS Kinesin heavy chain signature 385 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 PRINTS Kinesin heavy chain signature 296 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 Coils Coil 442 469 - -
Lja6g0979 1255 MobiDBLite consensus disorder prediction 1 79 - -
Lja6g0979 1255 Gene3D Kinesin motor domain 91 468 IPR036961 -
Lja6g0979 1255 SMART kinesin_4 97 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 Pfam Kinesin motor domain 120 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 PANTHER KINESIN-LIKE PROTEIN KIN-12B 65 523 - -
Lja6g0979 1255 Coils Coil 1010 1037 - -
Lja6g0979 1255 Coils Coil 1103 1141 - -
Lja6g0979 1255 Coils Coil 895 922 - -
Lja6g0979 1255 Coils Coil 1145 1197 - -
Lja6g0979 1255 Coils Coil 868 888 - -
Lja6g0979 1255 PANTHER KINESIN-LIKE PROTEIN KIN-12B 567 1255 - -
Lja6g0979 1255 PANTHER CENTROMERE PROTEIN E 567 1255 - -
Lja6g0979 1255 MobiDBLite consensus disorder prediction 667 686 - -
Lja6g0979 1255 MobiDBLite consensus disorder prediction 626 686 - -
Lja6g0979 1255 ProSiteProfiles Kinesin motor domain profile. 99 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja6g0979 1255 MobiDBLite consensus disorder prediction 632 659 - -
Lja6g0979 1255 ProSitePatterns Kinesin motor domain signature. 330 341 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja6g0979 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0979 Lja-Chr6 21843088 21850552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0979 100 467 Miscellaneous Gene Families AT4G39050 38.400 2.68e-63 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0979 K10400 - gmx:100785790 1776.14