Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0959 ATGAAACTGAGCCCAAGAGAGATCGCGAAAATAGAGCTACACAATGCTGGATTCCTGGCCCAGAAACGCCTTGCTCGTGGTTTAAGACTCAATTACACTGAAGCTGTTGCTCTCATAGCAGCACAGACTTTGGAATTTATTCGGGATGGTGATAAGACTGTTGCAGAGCTTATGTCTATTGGGAGAGAACTCTTAGGAAGGAGACAAGTTCTTCCAGCTGTCCCCCATCTCTTGGATACTGTTCAGGTTGAAGGTACCTTTCATGATGGGACTAAGCTAGTCACTATTCATGACCCCATTGCTAATGAGAATGGAAACATGGAACTAGCATTATTTGGTTCTTTTCTCCCAGTACCTTCACTTGGCAGGTTTACCGAGAGCAAAGAAGATGATATAATTCCTGGTACTGTAATATCTAGAGATGGAAGCCTGATTCTTAACTCTGGAAGGGATGCAGCAATTCTCAAAGTTGTCAACAAAGGAGACCGGCCAATTCAGGTTGGAAGCCACTACCATTTTATTGAAGTAAATCCCTACTTAACCTTTGATCGAAGGAAAGCATTTGGCAAGCGCCTCAATATAGCTTCTGGAACTACCACGCGCTTTGAGCCAGGGGAAAGTAAAAGTGTTGTACTCGTAAGTATTGGAGGTAACAAAGTCATTAGAGGAGGTAACAACATTGTTGATGGTCCAGTAAATAATTCTAATTGCATAGAAGCCATGGAGGCTGTGACCAAAAGGGGATTTGGGCATATGGAAGAGGCAAATGCAAGGGAAGGTATTACTGGGGAAGACTATTCACTTACTACACTAATTTCTCGAGAAGAGTATGCTAACAAATATGGCCCCACTACTGGTGATAAAATCCGTCTTGGTGACACTAACTTGTTTGCCGAAATTGAAAAGGATTTTGCTGTCTATGGTGATGAATGTATTTTTGGAGGTGGGAAAGTCATAAGAGATGGAATGGGTCAGTCATGCGGCCATTCACCTGATGGATCCTTGGATACTGTTATAACAAATGCCGTGATCATTGATTATACTGGAATTATCAAAGCAGATATCGGTGTTAAAGATGGCCTTATTGTCTCAATTGGAAAAGCAGGAAATCCAGATGTGATGAATGGTGTATTCCTTAATATGATCATTGGGGCCAATACTGAAGTTATTGCTGGAGAGGGCTTGATTGTAACAACCGGGGCTATAGATTGTCATGTGCATTTTATATGCCCTCAATTAGTATACGAAGCCATATCAAGTGGTATCACAACATTAGTGGGAGGAGGAACAGGACCAGCTGATGGAACACGTGCTACAACTTGTACACCAGCTCCAAGTCAGATGAAACTAATGTTGCAATCAACAGATGACCTGCCTCTGAACTTTGGTTTTACTGGAAAAGGGAATAGTGCCAAGCCTGATGAACTTCATGAAATAATCAGGGCTGGAGCTATGGGACTGAAGCTGCATGAGGACTGGGGATCTACACCAGCAGCTATAGACTGTTGCTTAACTGTTGCGGAACAATATGGCATTCAGGTTAATATACACACTGACACCTTAAATGAATCTGGATTTGTGGAAGATACAATTGCTGCATTCAAAGGAAGAACTATTCATACTTACCACAGTGAAGGTGCAGGTGGCGGCCATGCTCCAGATATCATCAAAGTATGTGGTGTGAAGAATGTCCTACCCTCATCAACAAATCCTACACGCCCTTATACGTCTAATACCATAGATGAGCATCTTGATATGTTGATGGTCTGCCATCATCTTGATAAGGATATTCCAGAAGATATAGCTTTTGCAGAATCAAGGATAAGAGCTGAAACAATAGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGTATTATATCTTCTGATTCACAGGCTATGGGGCGAATTGGAGAGGTGATAAGCAGAACATGGCAAACTGCCAACAAGATGAAGTCACAAAGAGGACCACTGCTGCCCGATGAATCAGTCAATGACAATTTTCGGATCAAACGTTATGTCGCAAAGTACACTATAAATCCAGCTATAGCAAATGGTTTGTCACGATATGTTGGTTCAGTTGAGGTGGGAAAGTTAGCAGATCTCGTATTATGGAAGCCATCATTTTTTGGAGCAAAACCAGAAATGGTGATCAAAGGTGGTCAGATTGCATGGGCTAACATGGGTGACCCAAATGCAAGCATCCCAACGCCTGAACCGGTGATTATGAGGCCAATGTTCGGAGCATTTGGCAAGGCTGGGAGTTCGCACTCCATTACTTTTGTGAGCAAGGCAGCTTTGGACGAAGGGGTAAAAACTTCGTACGGACTTAACAAGAGGGTGGAAGCCGTGGACAGCAATGTGAGGAAGCTCACCAAACTAGACATGAAACTGAATGATGCCCTTCCACAAATCACTGTGGACCCAGAAACCTACACGGTCACAGCAGATGGAGCGGTTCTCACCTGCACCGCAGCTGCTTCTGTTCCTCTTTCGCGGAATTACTTCCTCTTTTAA 2520 0.4317 MKLSPREIAKIELHNAGFLAQKRLARGLRLNYTEAVALIAAQTLEFIRDGDKTVAELMSIGRELLGRRQVLPAVPHLLDTVQVEGTFHDGTKLVTIHDPIANENGNMELALFGSFLPVPSLGRFTESKEDDIIPGTVISRDGSLILNSGRDAAILKVVNKGDRPIQVGSHYHFIEVNPYLTFDRRKAFGKRLNIASGTTTRFEPGESKSVVLVSIGGNKVIRGGNNIVDGPVNNSNCIEAMEAVTKRGFGHMEEANAREGITGEDYSLTTLISREEYANKYGPTTGDKIRLGDTNLFAEIEKDFAVYGDECIFGGGKVIRDGMGQSCGHSPDGSLDTVITNAVIIDYTGIIKADIGVKDGLIVSIGKAGNPDVMNGVFLNMIIGANTEVIAGEGLIVTTGAIDCHVHFICPQLVYEAISSGITTLVGGGTGPADGTRATTCTPAPSQMKLMLQSTDDLPLNFGFTGKGNSAKPDELHEIIRAGAMGLKLHEDWGSTPAAIDCCLTVAEQYGIQVNIHTDTLNESGFVEDTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTSNTIDEHLDMLMVCHHLDKDIPEDIAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTANKMKSQRGPLLPDESVNDNFRIKRYVAKYTINPAIANGLSRYVGSVEVGKLADLVLWKPSFFGAKPEMVIKGGQIAWANMGDPNASIPTPEPVIMRPMFGAFGKAGSSHSITFVSKAALDEGVKTSYGLNKRVEAVDSNVRKLTKLDMKLNDALPQITVDPETYTVTADGAVLTCTAAASVPLSRNYFLF* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0959 839 Gene3D - 400 820 - -
Lja6g0959 839 Hamap Urease subunit alpha [ureC]. 270 839 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 TIGRFAM urease_alph: urease, alpha subunit 272 839 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 ProSiteProfiles Urease domain profile. 400 839 IPR017951 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 SUPERFAMILY Urease, beta-subunit 132 261 IPR036461 -
Lja6g0959 839 TIGRFAM urease_beta: urease, beta subunit 132 233 IPR002019 GO:0035550|GO:0043419
Lja6g0959 839 PANTHER UREASE 1 839 - -
Lja6g0959 839 SUPERFAMILY Composite domain of metallo-dependent hydrolases 680 750 IPR011059 GO:0016810
Lja6g0959 839 ProSitePatterns Urease active site. 588 604 IPR017950 GO:0009039
Lja6g0959 839 Pfam Amidohydrolase family 396 723 IPR006680 GO:0016787
Lja6g0959 839 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Lja6g0959 839 CDD Urease_gamma 4 100 IPR002026 GO:0016151|GO:0043419
Lja6g0959 839 Pfam Urease beta subunit 134 230 IPR002019 GO:0035550|GO:0043419
Lja6g0959 839 SUPERFAMILY Metallo-dependent hydrolases 400 839 IPR032466 -
Lja6g0959 839 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Lja6g0959 839 Gene3D Urease, subunit C, domain 1 270 751 IPR011059 GO:0016810
Lja6g0959 839 SUPERFAMILY Composite domain of metallo-dependent hydrolases 271 448 IPR011059 GO:0016810
Lja6g0959 839 PRINTS Urea amidohydrolase (urease) protein signature 672 687 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 PRINTS Urea amidohydrolase (urease) protein signature 698 711 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 PRINTS Urea amidohydrolase (urease) protein signature 605 621 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 PRINTS Urea amidohydrolase (urease) protein signature 566 583 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 PIRSF Urease 1 839 IPR008221 GO:0006807|GO:0009039|GO:0016151
Lja6g0959 839 TIGRFAM urease_gam: urease, gamma subunit 1 101 IPR002026 GO:0016151|GO:0043419
Lja6g0959 839 Gene3D Urease, beta subunit 151 269 IPR036461 -
Lja6g0959 839 Pfam Urease alpha-subunit, N-terminal domain 272 390 IPR011612 -
Lja6g0959 839 Pfam Urease subunit beta-alpha linker domain 232 265 IPR040881 -
Lja6g0959 839 CDD Urease_beta 132 232 IPR002019 GO:0035550|GO:0043419
Lja6g0959 839 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Lja6g0959 839 CDD Urease_alpha 272 838 IPR005848 GO:0006807|GO:0009039|GO:0016151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0959 K01427 - gmx:547672 1478.38