Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0947 ATGGCCTCGTATGATGAGAACCAAGGAAAGCCTCTACCCAAGTTTGGGGAATGGGATGTAAATGATCCTGCCTCAGCTGAAGGATTCACTGTTATATTTAACAAAGCAAGAGATGAAAAGAAAATTGCCTCGGCATCGGGACGTTTTCCTTCACAAAGAAGATATGATTCACGCTCTCGCACCCGCAAGAGTGATAAAAAATACAAGAGTTCCTCAAAGAGAAAGTGGTTTTGCTTTAGCCTTTAG 246 0.4228 MASYDENQGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASASGRFPSQRRYDSRSRTRKSDKKYKSSSKRKWFCFSL* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0947 81 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 65 IPR040387 -
Lja6g0947 81 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Lja6g0947 81 PANTHER PROTEIN NOI4 6 65 - -
Lja6g0947 81 MobiDBLite consensus disorder prediction 43 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0947 Lja-Chr6 21114300 21116191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0947 - - gmx:102669045 116.701