Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0946 ATGGCTGAATCTTCTTCAACTTGTCTTGTTCCAGAGGGCGACCCGATTCGTGCGCTTAGCGAATCTATCTCTTTTGGGAGGTTTATGTCCGAGAGACTGGATTGGGAGAAATGGTCAGCGTTCACGACACACAAACGCTATGTTGAGGAAGCTGAAAAGTATTCCAAGCCAGGTTCCGTTGCTGCAAAAAAAGCCTACTTTGAGGCTCATTACAAGAGAAAAGCTGCTGAGAAAGAAGCTGCATTGATCCAAGAAGAAAATGCTCAAGTTAATGGAGCTTTTGATTCAAAAACTAAGGAAGGAAATTGCACTGATTCATCCATTGTGATGAAGTCGAAAGCGAACAGCCACGAGACTGCCAATGAACAGCTTGGTGAAGAAGATGCTGTTGTTGATTGTGCTGATACAAACCAATATAATGAGTTTGATCCTGTTGAAGTCCATAAGGATGTCTCACATCCTTGTGCTGATATAAACCACTATAATGAGTTTGATCCTGTCGAAGTCCATAAGAATTTAACCATTCTGGAAGAAGAGAAGAAACCTGAACCTGGCACTGCTGGTGAGGAAATTTTGGCTTTTCCTGTTGAGGGAGAAGCGGTTAATTCGTCTCCAAAATTATCAACCAATTCTAAGGCTTCCAAGCTCTCTCATCCTCTTGATGAAAGGAAAGCTTCTGCAGGTGTACCGCCACCACCCAGAAATGGAATAAACTGTGTTTCAAAAAGTAAGATGCGTGTAGGGGTCAGAGATACAGTTGAGAAGAAGAGACTAACTGCAGGGTCACTCCACATGTCAATCGATCTCCCCTCTGGCACTCGTGAATCAAGCAAAATAGCTTCTGCAGCTTTACAATCCAGAAATGGCTTAAACAGTTTTTCAACAAGTCAGAAATCTGTTGGAGGCTCACTTGAGAAGAAGAGGATAATTGCACCATCACTTTCCAAGTCAATCAATCTTTCATCTGGAACTGGTGTATCAAACAAAACAGCTACTGCAGCTGTTAAATCTGGAAACGGAATAAGCCTTGCTTCAAAAAGTATGAAGTCCGACTTAGTGGAGAAGAAATCAACTGCAAGGTCACTCCACATGTCAATCAATCTCTCTTCTGGAGCAGACAAAAGAAGTAAAACAGCTTCAGCATTTGAACATAACAGAATTAAAAGAATTGCTTGTAATTTACCCAAAGATCGTCCACTGGCATTACAGACATCAACACCAACCAAGGCATCTCATGGCTTGTTAAAGGAAGCTTCAGAAAACCCCCTTTCTCAGAGTAGAAGGACTGAAAGATTACTCAATAAGTCTCTTTGTGGAGGTGTTACAGTAAATGCAAATCGTTCCTCCCTTTCTGTTATGTGCTCGAAACCTGTAAGCACCATCGGAAGCCAAACCCATACTAAATCATTGCCTTTTAGATTCAGAAGTGAAGAAAGAGCAATAAAACGTAAAGAGAGGATGGATGAAATTAAACCCAAGGAGGAAGAGAAAGTTCAGCTGCAAAGGATACCCAAGGGGAAAGCAGAACATGATCACAAGAAGCTACAGCAGAGCGGTGGATCTAAATTCAAACTGAATGAGGACGGGTCTAGTGGAACACAATCATCAACTAAACAAGTTAGAAAGGTCTCACTTACAATGTCTGGGCCACCAAAACCTGATGGTAAAGCAAGTTCTAGTACAGTGCAGGACAAAACCATAGGAAGTTCATGGAAGCCTCCCATCAACACCAATAGTTCCAAACATATTACTGAAAAAGCTAACCGAACAACTAAGCAATCAAGAACTTCATCAAATACCACACGAGAAAATGCTTCACCAAATATTCAGAACTAA 1836 0.415 MAESSSTCLVPEGDPIRALSESISFGRFMSERLDWEKWSAFTTHKRYVEEAEKYSKPGSVAAKKAYFEAHYKRKAAEKEAALIQEENAQVNGAFDSKTKEGNCTDSSIVMKSKANSHETANEQLGEEDAVVDCADTNQYNEFDPVEVHKDVSHPCADINHYNEFDPVEVHKNLTILEEEKKPEPGTAGEEILAFPVEGEAVNSSPKLSTNSKASKLSHPLDERKASAGVPPPPRNGINCVSKSKMRVGVRDTVEKKRLTAGSLHMSIDLPSGTRESSKIASAALQSRNGLNSFSTSQKSVGGSLEKKRIIAPSLSKSINLSSGTGVSNKTATAAVKSGNGISLASKSMKSDLVEKKSTARSLHMSINLSSGADKRSKTASAFEHNRIKRIACNLPKDRPLALQTSTPTKASHGLLKEASENPLSQSRRTERLLNKSLCGGVTVNANRSSLSVMCSKPVSTIGSQTHTKSLPFRFRSEERAIKRKERMDEIKPKEEEKVQLQRIPKGKAEHDHKKLQQSGGSKFKLNEDGSSGTQSSTKQVRKVSLTMSGPPKPDGKASSSTVQDKTIGSSWKPPINTNSSKHITEKANRTTKQSRTSSNTTRENASPNIQN* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0946 611 Coils Coil 73 93 - -
Lja6g0946 611 MobiDBLite consensus disorder prediction 519 544 - -
Lja6g0946 611 MobiDBLite consensus disorder prediction 553 611 - -
Lja6g0946 611 MobiDBLite consensus disorder prediction 483 518 - -
Lja6g0946 611 MobiDBLite consensus disorder prediction 200 240 - -
Lja6g0946 611 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 339 610 - -
Lja6g0946 611 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 7 281 - -
Lja6g0946 611 MobiDBLite consensus disorder prediction 401 428 - -
Lja6g0946 611 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 339 610 IPR044216 -
Lja6g0946 611 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 7 281 IPR044216 -
Lja6g0946 611 MobiDBLite consensus disorder prediction 483 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0946 Lja-Chr6 21039274 21044147 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0946 - - lja:Lj0g3v0214319.1 828.55