Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0945 ATGCACTTCACCACCATTCAACTACAACTTTCATTTCTTCCAAATTTTAACTTTGATTTTGGCATCAAATTCTCAACAAAATTAATGGCACAGGCTTCATCCTCCATTTTGGGTCTTAACCTCCCCATACTTCCTAAGACATCATCAAGGGATGTTCATGTTTATCCCTCTGGAAAAACCCTTTTTCCTCCATTGTCCAAGTTGAAGCCCCTCAGAGCCATGACAGGAGGCGACGCAAGAGAACAAAAGCTTGAAAGTGTGCCAAGATACAACAACAACAAGCCTCACTCCCAACCCAAAAAAAGAGTTGTCCCTTCTGCACCCATAGGTCTATGGGACCGGTTTTCTACAGCGAGGACGGTGTCACAGATGATGGAGACGATGGAGAGGATGATGGAGGACCCATTTGCGTTGAGCACACTCGAGTATCCATCATCTCCTCTGCCGAGTGAAGGGTACCGGACGAGGGGAAGGGCACCGTGGGAGATTAAAGAGGGAGAATGTGAATACAAGATGAGGTTTGATATGCCTGGGATGATCAAGGAAGATGTGAAGGTGTGGGTGGAAGAGAAGATGCTGGTCGTCAAGGCTGAAAAGACACCCAAGCAGAACAAACAAGAAGAAAAACAAGAGGAAGAAGAATGGTCTGCTAAGAGCTATGGCAGGTATAGTAGTAGGATTGCCTTGCCAGAGAATGTGCAGTATGAGAAGATTAAGGCAGAGATTAGGGATGGTGTTCTTTACATAACCATACCTAAGGCTACTACCTACTCAAACGTTCTTGATATCCATGTTCAATGA 801 0.4507 MHFTTIQLQLSFLPNFNFDFGIKFSTKLMAQASSSILGLNLPILPKTSSRDVHVYPSGKTLFPPLSKLKPLRAMTGGDAREQKLESVPRYNNNKPHSQPKKRVVPSAPIGLWDRFSTARTVSQMMETMERMMEDPFALSTLEYPSSPLPSEGYRTRGRAPWEIKEGECEYKMRFDMPGMIKEDVKVWVEEKMLVVKAEKTPKQNKQEEKQEEEEWSAKSYGRYSSRIALPENVQYEKIKAEIRDGVLYITIPKATTYSNVLDIHVQ* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0945 266 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 152 266 IPR002068 -
Lja6g0945 266 SUPERFAMILY HSP20-like chaperones 125 255 IPR008978 -
Lja6g0945 266 Gene3D - 111 265 IPR008978 -
Lja6g0945 266 MobiDBLite consensus disorder prediction 77 103 - -
Lja6g0945 266 CDD ACD_sHsps-like 162 253 - -
Lja6g0945 266 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 60 266 IPR044587 GO:0009408
Lja6g0945 266 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 60 266 - -
Lja6g0945 266 Pfam Hsp20/alpha crystallin family 162 265 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0945 Lja-Chr6 21031180 21033003 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0945 K13993 - gmx:100811966 282.722