Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0919 ATGGCAGCAACCATAGCAACAACAATGGCCATGATCAACTCCAAGTGCCTCAACACCAAGTTGATGATCAACCCCACCAACACCAAACTCACAACTTCAAAACCCACCATTTCCTTTCAAAACCTGCCAAAGGGTCTGTCCTCCGCTGAAAACACCAGCATCTCCACCACTTCCATGGCCGGCACCGCCATTGCCGGGGCCATTTTCTCGTCACTAGTAAGCTGCGACGCTGCCTTCGCCGCTCAGCAGATTGCCGAAATAGCAGAAGGCGATAACCGTGGCCTGGCTCTGCTGCTGCCATTGATTCCAGCAATTGCTTGGGTGCTGTTCAACATTCTGCAGCCGGCACTGAACCAGATCAACAGGATGCGTAACACCAAAGGGGTCATCGTTGGGCTTGGGCTCGGGCTTGGTGGGTTGGCGGCGGGCTCGGGGATGTTGTGGGCTCCGGAGGCGTCTGCCGGTGAGTTGGGTATGATTGCTGATGCCGCCGCCGCCGGAGGCAGTGATAACAGGGGGCAGCTTCTGCTGTTTGTGGTTGCTCCGGCTATTGGTTGGGTGCTGTTTAACATCTTGCAGCCAGCTCTCAACCAGATCAACAGGATGAGATCTGAGTGA 618 0.555 MAATIATTMAMINSKCLNTKLMINPTNTKLTTSKPTISFQNLPKGLSSAENTSISTTSMAGTAIAGAIFSSLVSCDAAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRNTKGVIVGLGLGLGGLAAGSGMLWAPEASAGELGMIADAAAAGGSDNRGQLLLFVVAPAIGWVLFNILQPALNQINRMRSE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0919 205 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 204 - -
Lja6g0919 205 Pfam Photosystem II protein Y (PsbY) 170 202 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lja6g0919 205 Pfam Photosystem II protein Y (PsbY) 91 123 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lja6g0919 205 Hamap Photosystem II protein Y [psbY]. 91 125 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lja6g0919 205 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 204 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0919 Lja-Chr6 20281912 20282529 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0919 K02723 - gmx:100814665 247.284