Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0776 ATGGGTCGCGGGGTGATGTTCATGTTGATGCTATGCATCTTGGGGGTTGCCGTGATGGGTGAAGACCCTTACATTTTCTACACATGGAATGTCACCTATGGTACCATTTCTCCACTTGGAGTCCCTCAGCAGGGTATCCTCATTAACGGCCAGTTCCCTGGACCAGAAATCAACAGCACCAGCAACAACAATGTGGTGGTGAATGTGTTCAACAACCTCGACGAGCCCCTCCAATTCACCTGGCACGGGGTCCAGCAGAGGAAGAACTCGTGGCAAGATGGTGTCGCGGGAACCTCATGCCCTATCCTTCCCGGCACGAACTACACCTACCATTTCCAGGTGAAGGATCAGATCGGAAGCTACTTCTACTACCCAACCACAGCCTTGCATAGAGCCGCTGGTGGGTTCGGTGGCCTAAGGATCTTTAGCCGATTATTGATCCCTGTCCCATACCCCGACCCCGAGGATGAGTACTGGGTCATCATTGGTGACTGGTATGCTAAGAGCCACAAAACCCTCAAAAGTCTCCTTGACAGTGGTCGCTCAATTGGAAGGCCTAATGGTGTTCTTATCAATGGCAAAACTGCCAAGGGTGATGGAAGTGACCAGCCTCTCTACACAATGAAGCCTGGAAAAACCTACAAGTACAGAATCTGTAATGTTGGTCTCAAGGACTCCCTCAACTTCAGGATCCAAGGCCACCCCATGAAGCTGGTCGAGACAGAAGGCTCCCACGTTGTCCAGAACACCTATGACTCCCTCGATGTCCACGTGGGTCAGTGCTACACTGTCCTCGTGACCGCCGATAAGGACCCCAAGGACTATTACTTGGTGGCCTCCACTCGTTTCACCAAGTACTCACTCACCGAAAAGGGAATCATCCGCTACACCAACGGCGTGGGACCTGCTTCACCTGAGCTCCCTCCTGCACCTGTTGGTTGGGCATGGTCTTTGAACCAATTCCGATCCTTCCGGTGGAACCTCACCGCTAGTGCCGCCAGGCCTAACCCTCAGGGTTCTTACCATTACGGTCAAATCAACATCACCCGCACCATCAAGCTCGTTAACACTGTCTCCAAAGCTCAAGGCAAGCTCCGATACGCAATCAATGGTGTCTCCCACGTCGATGGTGAGACTCCTCTCAAGCTCGCCGAGTATTTTGGTGTTGCTGACAAGGTTTTCAAGTACAACATCATCTCCGATGAACCCCCAGCAGATTTGAACACCATCACCTTGGCACCCAATGTCGTGAATGCTACATTCAGAACCTTCATTGAGATCATCTTTGAGAACCCTGGCAAAACCGTCCAGTCATACAACCTTGATGGTTACTCATTCTTTTTAGTCGCGGTAGAACCAGGGAAGTGGACCCCAGAGAAGAGGAAGAACTACAACCTTCTTGATACCGTGAGCAGACACACCGTTCAAGTTTTCCCCAAATCTTGGGCAGCTATCATGTTGACATTCGACAATGCTGGCATGTGGAACTTGAGGTCGGAGCATGCTGAGAATCGTTACTTGGGCCAACAACTCTACATTAGTGTTTTGTCCCCAGAACGTTCTCTAAGGGATGAGTACAACATTCTTGACTCTCAGCTTCTTTGCGGCATCGTCAAGGACTTGCCCAGGCCACGACCATATGTCTAG 1647 0.5094 MGRGVMFMLMLCILGVAVMGEDPYIFYTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNVVVNVFNNLDEPLQFTWHGVQQRKNSWQDGVAGTSCPILPGTNYTYHFQVKDQIGSYFYYPTTALHRAAGGFGGLRIFSRLLIPVPYPDPEDEYWVIIGDWYAKSHKTLKSLLDSGRSIGRPNGVLINGKTAKGDGSDQPLYTMKPGKTYKYRICNVGLKDSLNFRIQGHPMKLVETEGSHVVQNTYDSLDVHVGQCYTVLVTADKDPKDYYLVASTRFTKYSLTEKGIIRYTNGVGPASPELPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNTVSKAQGKLRYAINGVSHVDGETPLKLAEYFGVADKVFKYNIISDEPPADLNTITLAPNVVNATFRTFIEIIFENPGKTVQSYNLDGYSFFLVAVEPGKWTPEKRKNYNLLDTVSRHTVQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYISVLSPERSLRDEYNILDSQLLCGIVKDLPRPRPYV* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0776 548 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Lja6g0776 548 Gene3D - 154 334 IPR008972 -
Lja6g0776 548 Gene3D - 344 535 IPR008972 -
Lja6g0776 548 SUPERFAMILY Cupredoxins 19 171 IPR008972 -
Lja6g0776 548 Pfam Multicopper oxidase 381 518 IPR011706 GO:0005507|GO:0016491
Lja6g0776 548 SUPERFAMILY Cupredoxins 345 528 IPR008972 -
Lja6g0776 548 Pfam Multicopper oxidase 157 297 IPR001117 -
Lja6g0776 548 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 4 539 - -
Lja6g0776 548 PANTHER MULTI-COPPER OXIDASE 4 539 IPR045087 -
Lja6g0776 548 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Lja6g0776 548 Gene3D - 19 142 IPR008972 -
Lja6g0776 548 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0776 Lja-Chr6 17389378 17391406 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0776 K00423 - gmx:100812197 926.391