Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0775 ATGGGTCGGGGGGTGATGTTCATGTTGATGCTATGCATCTTGGGCGTTGCCGTGATGGGTGAAGACCCTTACATTTACTACACATGGAATGTCACCTATGGTACCATTTCTCCACTTGGAGTCCCTCAACAGGGTATCCTCATCAACGGCCAGTTCCCTGGACCAGAAATCAACAGCACCAGCAACAACAATGTAGTGGTGAACGTGTTTAACAACCTCGATGAGCCCCTCCAATTCACCTGGCACGGGTCATATAAACTGTATTCTCTAATTATTACTAACTTTATCTCTATAGGTGTCGCGGGAACCTCATGCCCTATTCTTCCCGGCACGAACTACACCTACCATTTCCAGGTGAAGGATCAGATCGGAAGCTACTTCTACTATCCAACCACAGCCCTGCACAGAGCCGCTGGTGGGTTCGGTGGCCTAAGGATCTTTAGTCGTTTGTTGATCCCTGTCCCATACCCCGACCCCGAGGATGAGTACTGGGTCATCATTGGTGACTGGTACGCCAAGAGCCACAAGACCCTGAAAAGCTTCCTCGACAGTGGTCGCTCTATTGGAAGGCCCGATGGTGTTCTCATCAACGGGAAAACCGCCAAGGGTGATGGCAGTGACCAACCTCTCTATACCATGAAGCCCGGGAAGACCTACAAGTACAGAATCTGCAACGTTGGTCTCAAGGACTCCCTCAACTTCAGGATCCAAGGCCACCCCATGAAGCTGGTCGAGACAGAAGGTTCCCACGTTGTCCAGAACAGCTATGACTCCCTCGACGTCCACGTGGGTCAGTGCTACACTGTCCTCGTGACAGCCGATAAGGACCCCAAGGACTATTACTTGGTGGCCTCCACTCGTTTCACCAAGTACTCACTCACCGAAAAGGGCATCATCCGCTACACCAACGGTGTGGGACCTGCCTCACCTGAGCTCCCTCCTGCACCTGTTGGCTGGGCATGGTCTTTGAACCAATTCCGATCCTTCAGGTGGAACCTCACCGCTAGTGCCGCCAGGCCTAACCCTCAGGGTTCCTACCATTACGGTCAGATCAACATCACCCGCACCATTAAGCTCGTTAACACTGTCTCCAAAGCTCAAGGCAAGCTCCGATACGCAATCAATGGTGTCTCCCACGTCGATGGTGAGACTCCTCTCAAGCTCGCCGAGTATTTTGGTGTTGCTGACAAGGTTTTCAAGTACAACATCATCTCCGACGAACCCCCAGCAGATTTGAACACCGTCACCTTGGCACCCAATGTCGTGAATGCTACATTCAGAACCTTCATTGAGATCATCTTTGAGAACCCTGGCAAAACCGTCCAATCATACAACCTTGATGGTTACTCATTCTTTTTAGTCGCGGTAGAACCAGGAAAGTGGACCCCAGAGAAGAGGAAGAACTACAACCTTCTTGATACCGTGAGCAGACACACCGTTCAAGTCTTCCCCAAATCTTGGGCAGCAATCATGTTGACATTCGACAATGCCGGTATGTGGAACTTGAGGTCGGAGCATGCTGAAAATCGTTACTTGGGCCAACAACTCTACATTAGTGTTTTGTCCCCAGAACGTTCTTTGAGGGATGAGTACAACATTCTTGACTCTCAACTTCTTTGCGGCATCGTCAAGGACATGCCCAGGCCACAACCATACGTCTAG 1662 0.5078 MGRGVMFMLMLCILGVAVMGEDPYIYYTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNVVVNVFNNLDEPLQFTWHGSYKLYSLIITNFISIGVAGTSCPILPGTNYTYHFQVKDQIGSYFYYPTTALHRAAGGFGGLRIFSRLLIPVPYPDPEDEYWVIIGDWYAKSHKTLKSFLDSGRSIGRPDGVLINGKTAKGDGSDQPLYTMKPGKTYKYRICNVGLKDSLNFRIQGHPMKLVETEGSHVVQNSYDSLDVHVGQCYTVLVTADKDPKDYYLVASTRFTKYSLTEKGIIRYTNGVGPASPELPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNTVSKAQGKLRYAINGVSHVDGETPLKLAEYFGVADKVFKYNIISDEPPADLNTVTLAPNVVNATFRTFIEIIFENPGKTVQSYNLDGYSFFLVAVEPGKWTPEKRKNYNLLDTVSRHTVQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYISVLSPERSLRDEYNILDSQLLCGIVKDMPRPQPYV* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0775 553 SUPERFAMILY Cupredoxins 350 533 IPR008972 -
Lja6g0775 553 Gene3D - 159 339 IPR008972 -
Lja6g0775 553 CDD CuRO_2_AAO_like_1 161 301 IPR034271 -
Lja6g0775 553 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 4 544 - -
Lja6g0775 553 Pfam Multicopper oxidase 162 302 IPR001117 -
Lja6g0775 553 Pfam Multicopper oxidase 30 148 IPR011707 GO:0005507
Lja6g0775 553 Pfam Multicopper oxidase 387 523 IPR011706 GO:0005507|GO:0016491
Lja6g0775 553 Gene3D - 349 541 IPR008972 -
Lja6g0775 553 PANTHER MULTI-COPPER OXIDASE 4 544 IPR045087 -
Lja6g0775 553 SUPERFAMILY Cupredoxins 19 176 IPR008972 -
Lja6g0775 553 Gene3D - 25 149 IPR008972 -
Lja6g0775 553 SUPERFAMILY Cupredoxins 157 340 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0775 Lja-Chr6 17317962 17319811 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0775 K00423 - gmx:100812197 899.812