Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0750 ATGGATCTAGCATATTTCTGCTGCACCTTATTGCTACTATTTTTGGTTGGTTTTGGAAGCTCAGATTTAGCAGCAGACATACAAGACTGTGGTGACAAACTAGTTGGGCTAGCTGGCTGTCGTCCTTACGTTGGTGGTGATGCTAAAGTTCCTTCCATAGACTGCTGCAGTGGCCTCAAAGTGGTGCTAGAGCAAAGCAAGAAATGCCTCTGCATCCTCATCAAAGATCGCGATGACCCTGACCTTGGTTTCAAGATGAATGCCACTCTTGCAGTTCATCTTCCTAGCGCTTGCCATGCCCCTGCTAATATAACTCAGTGTGTAGATCTTTTGCATTTATCACCTAAGTCTCCGGAAGCGAAGGTGTTTGAGGGATTTCAAGGCTCCTCTAAAACAAACAGTTCCACCCCTGTTTCAAAAGGTGGTGTTGATCAGGGATCATCAAGTAGTACAATTGCTCAAGATAAGAGCTATGGGTTGGGAAAGAGGTTGCTGGTGGCAGAGGTGGTTACTATTATTTTACCATTTGTTTTCATGTCCCACTTTTTCATCCTAATTTGA 561 0.4421 MDLAYFCCTLLLLFLVGFGSSDLAADIQDCGDKLVGLAGCRPYVGGDAKVPSIDCCSGLKVVLEQSKKCLCILIKDRDDPDLGFKMNATLAVHLPSACHAPANITQCVDLLHLSPKSPEAKVFEGFQGSSKTNSSTPVSKGGVDQGSSSSTIAQDKSYGLGKRLLVAEVVTIILPFVFMSHFFILI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0750 186 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 108 IPR036312 -
Lja6g0750 186 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 9 184 - -
Lja6g0750 186 Gene3D - 26 111 IPR036312 -
Lja6g0750 186 SMART aai_6 30 107 IPR016140 -
Lja6g0750 186 Pfam Probable lipid transfer 26 107 IPR016140 -
Lja6g0750 186 MobiDBLite consensus disorder prediction 126 151 - -
Lja6g0750 186 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 184 IPR043325 -
Lja6g0750 186 CDD AAI_LTSS 37 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0750 Lja-Chr6 16404497 16406337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0750 6 174 Acyl Lipid Metabolism Gene Families AT1G55260 46.243 1.48e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0750 - - pvu:PHAVU_001G268300g 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0750 6 16404497 16406337 Lja6g0750 6 16404497 16406337 ECH