Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0749 ATGATTGCGGAGTTTGATCCAACATCTGCTCTTGAGCCTCACAAGATGTCTAGAGCTTCATCGGCTGCACTTACGAGTGGCCAAAAGCCATCTAAGTTTGCTGCGAAATCTGGATTTGTCATCCCTAAAAACAAATTATCAGGGTCATTGGTCCCGGTTTTCCGAGGGGCTAAAAAACATGGGGTCACCGGAGGAGCCGTCAATGAAGAAAGTTTGAAACAAATTGAGAGGGTTACAAAATGGGGACCTGATCTGACACAAGATGCTTCTGTCAAGAGAGCAAAGGCTATGGCTCTGCAGATTCGAGTGGATCAGATTACGAAGCAGTTAGAATCAGAAGAATTACAAATTGGGGACACTCAAAACTTGCCAATAGCTTCTGAGAACCCAAATCAGAGCACATCTGGCTCTGACATGAACAGCAAGAAGTCAGAAATGCTCGAACTTGAAAAACGGGAAGCAATAGGTGAAATACTAAAATTAGATCCAAGTTACAAGCCTCCACCTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTACCTGTCCAAGAACATCCTGGGCACAAATTTATTGGTCTAATATATGGACCTGAAGGTGATACTCAAAAGCGACTAGAAAAGGAAACTGGTGCGAAGATAAAAATTCATGGAACCAGAGCAGATACAGGAGACAAAGGTGAAATTAAACCAGGAACTGATATCCAATGCAGTTACCAAGAGATGCATGTTAACATATCAGCTGATAGTTTCGACAAAGTCGATGCAGCAGTGTCCATCATTGAACTACTACTTAGCTCTATAACTGGGAATTCAGCTGCTGTTTCCACACCTGTATCTGTTTCTGGGGATAGCACTAATGTTCCGAGCCAAAGCCAAGATGCCCCCCCTTCTAATGCAGTTTCTCTGCCTTCGGAAAACCAGGCTGTGTTGCAGCCAGCAGCTGTTACACAAATGCATGGAGACCATTTTCAATACCCTGGTCCATGGTTTTCAGTAGCTCCATCTCATACCCCTTTAGGTGCTGCTTCTGGCAGTTCAGTCCCTCCATATCCACCAGGTAGAACACCCCATTTTCCATCACAAACAATGACTCCTTCAAATATGGTTTCTACTTTTGGTGCTCAACCTGTACCGGTTCCTGGATTCCCTGGATTCCGCCCTATGTTTCCAAATCATCATGTTTCTATGCAAGCACTACCACCTAGACCGATGTTACAGCATTCACATATGAATCAAGCAAGTCCTTTGGGTCACATTGTGCCGCCAAGAAATCCTTCTTCAGTACCTGTACAGAATTTTTCAGCTCCAACAAATGCCTCTGTTTCATTTCAAGTTACTTTAAGCCAACCAACACCAATAGGACACCTCCAGACACCAGTGTCTTCAATGCCTCAACCTATGTCTGGTATATCACCATCACCAATGCCTAACCAGCCATTGACCCCTCTTGGGGTATCTCCTAGACAGAGTGGAGGTCCTGTAAGTCTCAGCAATTTGGGACCGATGGCTCCACCGGCAGTTCCTCCTACAAGACCTGTTTCTCTAGGTCAATCTGCCACTTTTTCTCAACATCAATCAGGAATTTCCCCAGGACCGCCATCATCTTTAGGATCAATGGCTCCTGCACCTACTTACTCATCAAGACCTGTTTCGTTTCCATCGCCACGAATGTCGCCTTCAAATCCATTACCGCAGCAATCCGGAACACCTAATTCTTTTTCTGGGGTCACTCCTTATCAAGCCCATGCAACACCACTAGTCTTGACGACTTCAAATTCAGGAAATTTTACTTTTCAATCACAGAGGCCAAATGCAGACTATAGTCAAGTGGCTTCCAGACCAAACAGTCAAGCTACTGCTGAAGGTGGCATACAAGAGCCATCTTCTGGTCCACGTCCACCACCATTTGGGTTTTCTGTGCCTGATCAGCGTCTTCAAATGTTCCCCCGGACACAATCCCCCAGCCAGGTGGATCAAACTCAAGCTCATTTGTTTAATCTTCCCTTTGGGGGAAGATCAGGTTCTGTCTCAATTCCACCCCGACACACCACATTTCCCTATGCTGGTCAACCTGGACCTAGATCCCCAGCCCCCCAAATGGGTATGCAGAACTTCATTTCTGCCCCTCAAAGACCAAACTTTCCCACTCCTGGTGTCCAAGGTGGCATGCACATTCGACAAAACTATCCTCAGAGGGCATGGCCAGATATCCCAATGCCTTTGAATCAGAAGTTTGGAAACAATCACCCCATGGCTTCTGGTAAGCCTGCTTATCTTGCAGACCAAATTTATGATCCCTTCTCACCCACATCTGTTGCACCTCCACAACAGAAAGGTAATAATGGAAAATGA 2358 0.455 MIAEFDPTSALEPHKMSRASSAALTSGQKPSKFAAKSGFVIPKNKLSGSLVPVFRGAKKHGVTGGAVNEESLKQIERVTKWGPDLTQDASVKRAKAMALQIRVDQITKQLESEELQIGDTQNLPIASENPNQSTSGSDMNSKKSEMLELEKREAIGEILKLDPSYKPPPGFKPLLKEASIPLPVQEHPGHKFIGLIYGPEGDTQKRLEKETGAKIKIHGTRADTGDKGEIKPGTDIQCSYQEMHVNISADSFDKVDAAVSIIELLLSSITGNSAAVSTPVSVSGDSTNVPSQSQDAPPSNAVSLPSENQAVLQPAAVTQMHGDHFQYPGPWFSVAPSHTPLGAASGSSVPPYPPGRTPHFPSQTMTPSNMVSTFGAQPVPVPGFPGFRPMFPNHHVSMQALPPRPMLQHSHMNQASPLGHIVPPRNPSSVPVQNFSAPTNASVSFQVTLSQPTPIGHLQTPVSSMPQPMSGISPSPMPNQPLTPLGVSPRQSGGPVSLSNLGPMAPPAVPPTRPVSLGQSATFSQHQSGISPGPPSSLGSMAPAPTYSSRPVSFPSPRMSPSNPLPQQSGTPNSFSGVTPYQAHATPLVLTTSNSGNFTFQSQRPNADYSQVASRPNSQATAEGGIQEPSSGPRPPPFGFSVPDQRLQMFPRTQSPSQVDQTQAHLFNLPFGGRSGSVSIPPRHTTFPYAGQPGPRSPAPQMGMQNFISAPQRPNFPTPGVQGGMHIRQNYPQRAWPDIPMPLNQKFGNNHPMASGKPAYLADQIYDPFSPTSVAPPQQKGNNGK* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0749 785 MobiDBLite consensus disorder prediction 515 556 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 454 470 - -
Lja6g0749 785 Gene3D - 90 168 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 1 30 - -
Lja6g0749 785 PANTHER RNA-BINDING PROTEIN RELATED 25 779 IPR045071 -
Lja6g0749 785 Coils Coil 96 116 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 596 644 - -
Lja6g0749 785 ProSiteProfiles Type-1 KH domain profile. 191 262 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 275 304 - -
Lja6g0749 785 SMART kh_6 174 267 IPR004087 GO:0003676
Lja6g0749 785 MobiDBLite consensus disorder prediction 771 785 - -
Lja6g0749 785 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 25 779 - -
Lja6g0749 785 Gene3D K Homology domain, type 1 171 286 IPR036612 GO:0003723
Lja6g0749 785 MobiDBLite consensus disorder prediction 563 580 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 765 785 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 596 626 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 115 144 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 484 498 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 454 580 - -
Lja6g0749 785 MobiDBLite consensus disorder prediction 115 142 - -
Lja6g0749 785 Pfam KH domain 190 262 IPR004088 GO:0003723
Lja6g0749 785 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 178 271 IPR036612 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0749 K13095 - gmx:102668428 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0749 6 16372626 16379367 Lja6g0749 6 16372626 16379367 ECH