Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0726 ATGGCTTCTCCACCAGACACAAGCAAAACCATAAAGCTGGAACGTTACAACAGCTACCTCCGTAAAGTCAACAGCACAAAGCTTCTCAACGCTTCCTCCAAACTCCTCTTCCGCGCCACCCTCCTCGTCGCACTCGTCCTCGTCTTCCTCTTCACCTTCAACTACCCTCCCCTCGCCGCCGACACCACCCACCACTTCCACACCCACACCAACTTCCTCACCTCCGCATTCGGCGGCGGAGCCGCCTGGGAGAAGCAAGTCCGCAACTCCGCCACCCCACGCCGCCCCAACGGCATGTCCGTCCTCGTCACCGGCGCAGTCGGCTTCGTCGGCACACACTGCTCCCTCGCCTTGAAAAAACGCGGCGACGGCGTTTTAGGCCTTGACAACTTCAACACCTACTACGACCCGTCGTTGAAACGCGCCAGACAAGAGCTTCTGTCAAAACACCAAATCCACGTCGTCGACGGCGACATCAACGACGCGCCGCTGCTCACCAAGCTCTTCGATGTGGTGCCCTTCACTCACGTCCTCCACCTCGCCGCGCAAGCCGGTGTTCGCTACGCAATGCAGAACCCTCAATCGTACATCAGATCCAACATCGCTGGGTTCGTGAACCTTCTAGAAGTTTCCAAAGCAGTGAATCCGCAACCGTCGATTGTCTGGGCGTCTTCCAGCTCCGTCTACGGCCTCAACACCGAGAATCCATTCTCGGAGCTTCACCGGACAGATCAACCGGCGAGCCTCTACGCCGCGACGAAGAAAGCCGGCGAGGAAATCGCTCACACCTACAACCACATCTACGGGCTTTCCCTCACCGGGCTCAGATTCTTCACCGTGTACGGCCCATGGGGTCGGCCGGACATGGCGTACTTCTTCTTCACGAAGGCGATTCTCCAGGGGAAAGCCATCGACGTTTACAAGACGGTTGATGGGAAAGAGGTGGCGCGTGACTTCACGTACATCGATGACATCGTGAAGGGATGCTTAGGAGCACTGGACACGGCGGAGAAGAGCACCGGCAGCGGCGGGAAGAAGAAGGGGCCGGCGCAGTTGAGAGTGTACAACCTCGGGAACACTTCGCCGGTGCCGGTGGGGAAGCTGGTGGCGATCTTGGAGTCGCTGCTGGGCACGAAGGCCAAGAAACACGTGATCAAGATGCCGTCAAACGGCGACGTTCCGTACACGCACGCGAATGTAACGGCGGCGTTTCGAGACTTCGGGTATAAACCCACCACCGATCTCTCAACCGGGTTGAGGAAGTTTGTGAAGTGGTATGTTAGCTATTACGGGATCCAGCCGAGGGTAAAAAAGGAAAATCACATTGACAGCGAGGATTCCACTTGA 1347 0.5754 MASPPDTSKTIKLERYNSYLRKVNSTKLLNASSKLLFRATLLVALVLVFLFTFNYPPLAADTTHHFHTHTNFLTSAFGGGAAWEKQVRNSATPRRPNGMSVLVTGAVGFVGTHCSLALKKRGDGVLGLDNFNTYYDPSLKRARQELLSKHQIHVVDGDINDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYIRSNIAGFVNLLEVSKAVNPQPSIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKAILQGKAIDVYKTVDGKEVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAQLRVYNLGNTSPVPVGKLVAILESLLGTKAKKHVIKMPSNGDVPYTHANVTAAFRDFGYKPTTDLSTGLRKFVKWYVSYYGIQPRVKKENHIDSEDST* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0726 448 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Lja6g0726 448 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Lja6g0726 448 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Lja6g0726 448 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Lja6g0726 448 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Lja6g0726 448 PANTHER EPIMERASE-RELATED 1 442 - -
Lja6g0726 448 Gene3D - 98 432 - -
Lja6g0726 448 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 442 - -
Lja6g0726 448 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0726 Lja-Chr6 15976581 15978727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0726 1 447 Miscellaneous Gene Families AT3G23820 79.258 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0726 K08679 - zju:107422361 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0726 6 15976581 15978727 Lja6g0726 6 15976581 15978727 ECH