Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0725 ATGAAGCGGTTAGGGGAAGAGGAAAAGGAGAGGGAAGAGTTTGGTTTCCCACGACTGGCCTCATTCGTCTGCGAATGCGAGCCTCTCTCTGTCTCAGAGGAAGAACTTCAAGCCATCGAATCCACATTTCAATCCTCTCATTCCTCCCTCCGCCGCCGCCGCAGCAGCCACCGCCGATTGCCCACATCGCTTCTCGCTCTTCAACTCCCAACTCTCTCACCTTCTCACTCTCAAGGCTACTCAAGGATGAGATTGCCAGTAATGAAGTTTAGTGGCCAAATTACGTATAGCAGGAGTTTTGATGATGTACAGAAGGCTGTAACAAAGCTCTTAGAATTTGTTGAAGAAAAGAAAAGAGCGATGATGCGAATTGCAATTGGATTTGACATTGAGTGGAGACCCAGCTTCGTAAGAGGTGTTCCTCCTGGGAAAGTAGCAGTAATGCAGATATGTGGTGACACCAGTCATTGTCACGTTCTACATCTAATTCATTCTGGTATCCCCCAGAATCTACAGCTTTTACTTGAAGATCCCACAGTTTTGAAGGTTGGAGCTGGGATTGGCAGCGATGCTAGTAAGGTTTTTAGAGACTATAACGTATCTGTCAAAGGTGTGGAAGATCTTTCCTTTCATGCTAATGAAAAGCTAGGTGGAGGTATTAATAAGTGGGGTCTTGCAGCTTTGACTGAAACAGTTTTATCGAAACAGCTTAAAAAGCCCAACAAAATTAGACTGGGAAATTGGGAAACTCCTGTTTTGTCAAAGGAGCAACTACAGTATGCTGCCACTGATGCTTTTGCTTCTTGGTATCTCTATGAGGCAATTAAAAATCTCCCAGACAGTAGTGGCAAAGATGGTGGTGCGCCGCAACAATGA 876 0.4521 MKRLGEEEKEREEFGFPRLASFVCECEPLSVSEEELQAIESTFQSSHSSLRRRRSSHRRLPTSLLALQLPTLSPSHSQGYSRMRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRGVPPGKVAVMQICGDTSHCHVLHLIHSGIPQNLQLLLEDPTVLKVGAGIGSDASKVFRDYNVSVKGVEDLSFHANEKLGGGINKWGLAALTETVLSKQLKKPNKIRLGNWETPVLSKEQLQYAATDAFASWYLYEAIKNLPDSSGKDGGAPQQ* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0725 291 CDD WRN_exo 116 277 - -
Lja6g0725 291 PANTHER 3-5 EXONUCLEASE 59 282 - -
Lja6g0725 291 Gene3D - 75 283 IPR036397 GO:0003676
Lja6g0725 291 Pfam 3'-5' exonuclease 109 277 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lja6g0725 291 SUPERFAMILY Ribonuclease H-like 125 275 IPR012337 -
Lja6g0725 291 SMART 35exoneu6 101 280 IPR002562 GO:0003676|GO:0006139|GO:0008408
Lja6g0725 291 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 59 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0725 Lja-Chr6 15951709 15957387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0725 K22807 - gmx:100801291 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0725 6 15951709 15957387 Lja6g0725 6 15951709 15957387 ECH