Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0713 ATGTCGCTGGCTTGTAGCAGATCAAGTGTGGGACTAGCTGTGGACAACCCCGAACTGTTTAATCGGATTGCAAAACAGTTTTATTTGAAGGCTTCCATGAGATATATTATTTTACTTTGGGGAGAAAAATCAAGCCTGATCAGAGAAGTAGAGAAAGAGGTGCCAGTCTTTACTTTCATGGAAGTCATACATTTGGGACGAGAGAGTCGCAAGGCATTGTTTGGTTCTCATGATGCTCGGCAGCACTTAACGTATGAAGCAATAAAATCTGATGACATTGCTACACTTATGTACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATTAAAAATTTATGTGACATTGTACCTGCTGAAGTTGGGGATAGATTTCTAACCATGCTGCCTCCTTGGCATGCATATGAAAGAGCTTGTGAATATTTCATTTTTTCATGCGGTGTTGAACAAGTATACACAACCGTGAGAAACTTGAAGGATGATTTGGGACGCTATCAGCCACATTATTTGATTTCTGTTCCTTTAGTTTATGAAACATTATATAGTGGGATCCAGAAGCAGATATCTAGAAGCTCCCTTGTTAGAAAGCTTGTTGCACTGACATTCATAAGGGTCAGCTTAGGGTACATGGAGTGTAAGCGGATTTATGAGGGTAAATGTCTAACAAAGGATCCGAAGTCACCTTCCTATCTCTATTCGGTGTTGGATTGGTTATGGGCAAGAGTTATTGCTGCAATATTATTTCCAGTTCATATGCTGGCAAAGAAACTGGTCTACAGTAAAATTCATTTAGCCATTGGAATATTGAAGGCTGGAATAAGTGGTGGTGGTAGCTTATCTTCTCATGTTGATAAGTTTTTTGAGGCCATTGGTGTGAACGTGCAGAATGGATATGGTTTGACAGAAACTTCACCAGTTGTTGCTGCTCGGCAGCTTAGTTGTAATGTTATTGGATCTGTTGGGCATCCAATTAAGCATACAGAGTTCAAAGTTGTAGATTCTGAAACTGATGAAGTTCTTCCACCTGGTTCAAAGGGGATTTTAAAAGTCAGGGGCCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCATAGATAAGGATGGCTGGCTGAGTACTGGTGATATAGGTTGGATTGTTCCCTTCCATTCAACTGGGCGTAGTCGTAATTCTGGTGGTGTGATTGTTGTGGATGGCCGTGCTAAAGACACGATTGTGCTTTCAACAGGTGAAAATGTTGAACCGGGAGAACTAGAAGAAGCTGCAATGAGGAGTAACCTCATACAACAAATTGTTGTCATTGGCCAGGATAAGCGACGTCTAGGAGCTGTAATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCAGCGAGGGAATTGTCAATTATAGACTCCGATAGTTCAGATGTCAGTCAGGAAAAAGTGACCAACCTAATCCATAAAGAATTGAAGACCTGGATGTCAGGGTCTACATTTCAAATTGGGCCAATCCTTCTCGTAAACGATCCCTTCACGATTGATAATGGGCTATTGACACCCACCATGAAAATTCGAAGGGATAGAGTTGTGGCTCAATACAGGAACCAAATAGAGAATCTGTACAAGTAA 1650 0.4091 MSLACSRSSVGLAVDNPELFNRIAKQFYLKASMRYIILLWGEKSSLIREVEKEVPVFTFMEVIHLGRESRKALFGSHDARQHLTYEAIKSDDIATLMYTSGTTGNPKGVMLTHQNLLHQIKNLCDIVPAEVGDRFLTMLPPWHAYERACEYFIFSCGVEQVYTTVRNLKDDLGRYQPHYLISVPLVYETLYSGIQKQISRSSLVRKLVALTFIRVSLGYMECKRIYEGKCLTKDPKSPSYLYSVLDWLWARVIAAILFPVHMLAKKLVYSKIHLAIGILKAGISGGGSLSSHVDKFFEAIGVNVQNGYGLTETSPVVAARQLSCNVIGSVGHPIKHTEFKVVDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVIDKDGWLSTGDIGWIVPFHSTGRSRNSGGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSNLIQQIVVIGQDKRRLGAVIVPNKEEVLKAARELSIIDSDSSDVSQEKVTNLIHKELKTWMSGSTFQIGPILLVNDPFTIDNGLLTPTMKIRRDRVVAQYRNQIENLYK* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0713 549 Gene3D Luciferase; Domain 3 324 394 - -
Lja6g0713 549 Gene3D - 419 546 IPR045851 -
Lja6g0713 549 Gene3D - 3 217 IPR042099 -
Lja6g0713 549 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 8 549 - -
Lja6g0713 549 Pfam AMP-binding enzyme 4 422 IPR000873 -
Lja6g0713 549 ProSitePatterns Putative AMP-binding domain signature. 96 107 IPR020845 -
Lja6g0713 549 Gene3D - 278 323 - -
Lja6g0713 549 SUPERFAMILY Acetyl-CoA synthetase-like 76 548 - -
Lja6g0713 549 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 8 549 - -
Lja6g0713 549 PRINTS AMP-binding signature 91 102 IPR020459 -
Lja6g0713 549 PRINTS AMP-binding signature 103 111 IPR020459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0713 Lja-Chr6 15794237 15805445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0713 1 549 Acyl Lipid Metabolism Gene Families AT3G23790 68.909 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0713 K01897 - gmx:100782583 947.577