Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0712 ATGGCGTCGTTTTGCCCTGTCATGTCTCACTCCTTCTTCTGCATTTCCTCTCCAACACCACGTTTTCCATGCTGCAACGACACCGTTCAATCTCACTGTGCCCCTCTCCCACTCTTGCCCCAACGTTCATGCTCCTCCCAAAGGGGTGCTTGTTTACGATGGGGGAGGGAATCACCAAGAACCAGGATACATGCTTCATTGGCAGGTGTTTCAGTGGAAGATGTATCGGTAGAAGAAAAATTACAGCTTCCGAAAGGAGAAACTTGGTCAGTTCACAAGTTTGGAGGGACTTGTGTGGGAACCTCTGTGAGAATCAGAAATGTTGCGGAGGTTATTATGAATGATTACTCAGATAGGAAATTTGTGGTGGTCTCTGCGATGTCAAAAGTGACGGACATGATGTATGATCTGATTCATAAGGCTCAATCCCGAGACGATGCATATTTATCTGCTCTGGAAGCTGTTTCAGAGAAGCACAGCTCAACTGCACGTGACTTGCTTGATGGAGATGATCTTGTTGCTTTCTTATCGCACTTGCATCAAGACATCAGTAACCTCAAGGCAATGCTTCAAGCCATATGCATAGCTGGTCATGCAACAGAATCCTTTATTGACTTTGTTGTGGGACATGGGGAGTTATGGTCTGCACAGATGCTGTCTTATGTTATAAGGAAGAATGGGATTGATTGCAAATGGATGGACACAAGGGAAGTCCTCATTGTAAATCCTACTCGTTCTGATCAAGTTGATCCTGACTATTTGCAATCTGAACAAAGACTTGAGAAATGGTACTCCTTGAATCCATCTAAGGTTATCATTGCTACTGGTTTTATTGCAAGCACTCCTCAAAACATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCGGCTGCAATTATGGGTGCTCTGCTCAGGGCTCGTCAGGTCACAATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTTGTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAGGCATGGGAAATGTCTTATTTTGGAGCAAATGTGTTGCATCCGCGCACAATAATGCCAGTTATTCGATATGGCATACCCATAATAATAAGGAATATTTTCAACACCTCTGCTCCTGGAACAAAGATCTGCCATCCTTCTCTTATTGGTGATGAAGATAAGAAGATATTAAAAACCTTGGTCAAAGGCTTCACAACAATAGACAACTTGGCACTTGTAAATGTTGAGGGAACTGGAATGGCTGGTGTTCCAGGTACAGCCAGTACTATTTTTTCTGCCGTAAAAGAAGTTGGGGCTAATGTTATCATGATATCTCAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCGGTGCCTGAGAAGGAAGTAAAAGCTGTTGCTGAGGCATTGCAGACAGTATTTCATAATGCTTTGGGTGCACAGCGTCTTTCCCAGCAAACCTCTCAGGTTTCGGTGATTCCAGATTGCAGCATCTTGGCAGCTGTTGGCCAGAAAATGGCAAGCACTCCTGGAGTTAGCGCCACCCTCTTCAATGCATTGGCTAAGGCCAACATAAATATTCGTGCTATAGCACAAGGTTGTTCCGAGTACAACATTACCGTGGTTGTTAAGAGAGAGGATTCTATAAAGGCTTTACGGGCTGTGCATTCAAGATTTTATCTGTCAAGAACCACCATATCAATGGGCATTATTGGACCTGGATTAATAGGGAGTACCCTGCTTGACCAGCTAAGGGATCAGGCCGCAATTCTGAAAGAAGAATCAAAGATTGACTTGCGTGTGATGGGCATCATGGGTTCAAAGCTGATGCTTCTTGATGATGCAGGGATCAACTTAGTTAAATGGAGAGAACTTCAAGAGGAAAAAGGAGAAGCATCTAATTTGGAAAAGTTTGTTCAACATGTACAAGGAAATCATTTTATACCAAACACTGTAATAGTCGACTGCACATCTGACTCTGTCATAGCAAGCCAATATGATGACTGGCTGCGCAAAGGAATGCATATTATCACCCCTAATAAGAAGGCTAATTCAGGACCTCTAAATCAGTATTTGAAATTAAGAGCTCTTCAGAGGCAATCATACACACATTATTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATCAGCACTTTACAGGGCCTTCTTGAAACCGGTGACAAAATATTGAAAATTGAAGGCATTTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGTCGGGCTTTTAGTGAGGTAGTTGCTGAAGCGAAGGAAGCAGGTTATACTGAGCCAGATCCAAGGGATGATCTATCTGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCTGGCTTAAAGCTAGAGTTTTCTGATATTCCTGTTGAAAATCTTGTCCCTGAACCGTTAAGAGTTTGTGCCTCAGCTCAAGATTTTATCCAACAATTACCAAAATTTGACAAGGAGTTAACAAAGAAACAAGAAGATGCAGAGAGTGCAGGGGAAGTGTTGAGATACGTGGGAGTTGTAGACGTGAGAAATGAAAAGGGGGTGGTAGAGCTGAGAAGATACAAGAAGGATCATCCATTTGCACAACTATCCGGGTCAGATAATATAATTGCATTCACAACAAGAAGGTATCAGAATCAGCCTCTCATTGTTCGTGGACCAGGAGCTGGTGCACAAGTCACAGCTGGAGGAATATTCAGTGACATTTTACGACTAGCCTCCTATCTTGGTGCTCCATCTTAG 2769 0.4276 MASFCPVMSHSFFCISSPTPRFPCCNDTVQSHCAPLPLLPQRSCSSQRGACLRWGRESPRTRIHASLAGVSVEDVSVEEKLQLPKGETWSVHKFGGTCVGTSVRIRNVAEVIMNDYSDRKFVVVSAMSKVTDMMYDLIHKAQSRDDAYLSALEAVSEKHSSTARDLLDGDDLVAFLSHLHQDISNLKAMLQAICIAGHATESFIDFVVGHGELWSAQMLSYVIRKNGIDCKWMDTREVLIVNPTRSDQVDPDYLQSEQRLEKWYSLNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALLRARQVTIWTDVDGVYSADPRKVCDAVILKTLSYQEAWEMSYFGANVLHPRTIMPVIRYGIPIIIRNIFNTSAPGTKICHPSLIGDEDKKILKTLVKGFTTIDNLALVNVEGTGMAGVPGTASTIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEALQTVFHNALGAQRLSQQTSQVSVIPDCSILAAVGQKMASTPGVSATLFNALAKANINIRAIAQGCSEYNITVVVKREDSIKALRAVHSRFYLSRTTISMGIIGPGLIGSTLLDQLRDQAAILKEESKIDLRVMGIMGSKLMLLDDAGINLVKWRELQEEKGEASNLEKFVQHVQGNHFIPNTVIVDCTSDSVIASQYDDWLRKGMHIITPNKKANSGPLNQYLKLRALQRQSYTHYFYEATVGAGLPIISTLQGLLETGDKILKIEGIFSGTLSYIFNNFKDGRAFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLEFSDIPVENLVPEPLRVCASAQDFIQQLPKFDKELTKKQEDAESAGEVLRYVGVVDVRNEKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYQNQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0712 922 Gene3D - 396 559 - -
Lja6g0712 922 ProSiteProfiles ACT domain profile. 414 483 IPR002912 -
Lja6g0712 922 SUPERFAMILY ACT-like 398 473 IPR045865 -
Lja6g0712 922 CDD ACT_AKi-HSDH-ThrA_2 494 559 - -
Lja6g0712 922 Gene3D Dihydrodipicolinate Reductase; domain 2 725 896 - -
Lja6g0712 922 ProSitePatterns Homoserine dehydrogenase signature. 760 782 IPR019811 GO:0006520
Lja6g0712 922 Gene3D - 89 384 IPR036393 -
Lja6g0712 922 CDD ACT_AKi-HSDH-ThrA-like_1 409 482 - -
Lja6g0712 922 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 562 736 IPR036291 -
Lja6g0712 922 Gene3D - 564 914 - -
Lja6g0712 922 Pfam ACT domain 418 471 IPR002912 -
Lja6g0712 922 ProSitePatterns Aspartokinase signature. 91 99 IPR018042 GO:0004072|GO:0008652
Lja6g0712 922 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 1 922 - -
Lja6g0712 922 Pfam Homoserine dehydrogenase 714 912 IPR001342 GO:0006520
Lja6g0712 922 TIGRFAM asp_kinases: aspartate kinase 89 557 IPR001341 GO:0004072|GO:0008652
Lja6g0712 922 ProSiteProfiles ACT domain profile. 499 576 IPR002912 -
Lja6g0712 922 PANTHER - 1 922 IPR011147 GO:0004072|GO:0004412|GO:0009067
Lja6g0712 922 Pfam Homoserine dehydrogenase, NAD binding domain 570 706 IPR005106 GO:0016491|GO:0050661
Lja6g0712 922 Pfam Amino acid kinase family 90 371 IPR001048 -
Lja6g0712 922 SUPERFAMILY Carbamate kinase-like 90 384 IPR036393 -
Lja6g0712 922 CDD AAK_AK-HSDH 89 383 IPR041743 -
Lja6g0712 922 Pfam ACT domain 491 555 IPR027795 -
Lja6g0712 922 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 714 899 - -
Lja6g0712 922 SUPERFAMILY ACT-like 485 572 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0712 Lja-Chr6 15758238 15771908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0712 K12524 - gmx:100812202 1445.64