Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0597 ATGGAGAGAGCAAACAAATCTGCTTTGAAGTTTGTGAAGAACACTTCACACTCTGCAGCTCAATGGAGCAGTGCTAATTCTAGAGGAATGACAAAAGATGTACTCAAAGACAGGTTCGATGACAAGACCAAGGCTTCACCAAAGTCTCCTCCAAAGTCTCCTCCAAGAGAAAATACTAAACCGCAAGAATTCAAACTCCACACTCAAGAAAGAGCTGTGAAACGTGCAATGTTCAACTATGCAGTGACAACAAAATTCTATATCATGGAGCTGCAAAAGAAGCAAGAGGAGAAGTTACAAAAGATGATTGAAGAGGAAGAGATACGTATGCTGAGGAAGGACATGGTTCCCAGAGCTCAATTGATGCCTTATTTTGATAAACCATTCCTCCCACAAAGGCCAAACAAGACTGTTCCAAGACAATCATGCCTCCACATGATGAGTGGGAAGTGCTGGAGCTGCGCCACTGGAAATGAACTCTACAACTTACACCACTGTGGTGCTCAAGCACTTAAGCCGATTAAGTAA 528 0.428 MERANKSALKFVKNTSHSAAQWSSANSRGMTKDVLKDRFDDKTKASPKSPPKSPPRENTKPQEFKLHTQERAVKRAMFNYAVTTKFYIMELQKKQEEKLQKMIEEEEIRMLRKDMVPRAQLMPYFDKPFLPQRPNKTVPRQSCLHMMSGKCWSCATGNELYNLHHCGAQALKPIK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0597 175 Pfam Targeting protein for Xklp2 (TPX2) domain 64 135 IPR027329 -
Lja6g0597 175 Coils Coil 88 114 - -
Lja6g0597 175 MobiDBLite consensus disorder prediction 31 47 - -
Lja6g0597 175 MobiDBLite consensus disorder prediction 9 30 - -
Lja6g0597 175 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 168 - -
Lja6g0597 175 MobiDBLite consensus disorder prediction 1 66 - -
Lja6g0597 175 PANTHER TARGETING PROTEIN FOR XKLP2 1 168 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0597 Lja-Chr6 14347367 14350354 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0597 - - gmx:100305850 269.24