Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0580 ATGGCGCAAACCTTCATCTCTCTCTTCTTCCTCGTCTTCACCTCACACGTCCTCTCACGCATCTCTGGACAATCCAGCTCCATGGAATCGGTTCCTGATCTTCAGAAATCCATGTACACTGTCGTCAATGCGTATCCCTGTGTGCGCCTGCTAAACCTTTCTGGAACCATCGGTTGTTCAAATCCCGGGCGTGATAAGGTTGCGGCTTCTATTGTGAGGTTCGAGAATGTTGATGACATATCAGAGCCATCTGCTATATTAGTGTCATCGGATGAGTTTCCATCTCTCTTTACTAGAATATCAGATGACCCAGGCTTTGCAAGTAAAGTTGGTGGTGTACTGGTTGAATCAAGAACTGGTTCGCATAATACGTTAAAGGGATTCTCTCCGGATCGAAAGTTTCCTCAAGCTGAGTTTGCTCCTTATCATAATTTCAGCCATGAATGGAATCCAACTGGTTCTGGTATTATGTGGAAATCCTACAGTTTTCCAGTGTTTTTACTCACTTCTGGTGGCACAAAGACTCTTCAAGAGTTTGTGTTAAAGAATGAGGAAAAAAAGAAAGCTTATACTTCGAATGTTGCTGAGTTCGATCTGGTGATGCAGACGGTGAAATCTGGAACACATGATTCAGAGTCTTGTTTAAAAGAAGCAACATGCCTCCCTTTAGGTGGATACAGTGTCTGGTCATCTCTTCCTCCAATCAACATTTCGTCCTCAAAACCTTCTAAGCCCCTTATATTGACTGTAGCGTCTATGGATTCTGCTTCATTTTTTCGGGACAAAAACCTAGGCGCAGACTCTCCTATTTCTGGTTTAATTGCATTACTGGCAGCAGTTGACGCACTTTCTCATTTGGATGGTCTGGGTGACCTTAGTAAACAGCTTGTTTTTGTAGTTTTCACTGGAGAGGCGTGGGGTTACCTTGGAAGTAGGAGATTTTTGGAAGAACTTGACATGCACTCAGATGCTGTTCATGGCCTGAGTCACTCACTAGTAGAAACGGTCATTGAAATTGGTTCTGTTGGAAAGGGTCTCAGTCAAGGTGCTAAAAACTTTTTTGCTCATGCAGAAGGGGATTCTTCTGCCACTAATCAGACAATGGTGGCCTTGAAGCGTGCACAAGAGTCACTGCTATCTGAAAACATAAAGATAGCAGCTGCAAGTGCCTCAAATCCTGGGATTCCTCCATCATCTTTAATGGCCTTTTTGAAAAAGAATCCTGGAATCTCTGGCGTTGTCTTAGAAGATTTTGACTCTGTCTTTGTCAACAAGTTCTATCATAGCCATCTTGATGATTTATCAAATGTGAACTCATCATCTGTAGTTGCTGCCGCTTCTCTTATAGCCCGGACCCTTTACATACTTGCTAGTGAAACTAAAGATGTACAGGATTCAACCTTGGCTGCTATAAATGTAAATGTCTCACTTGTTGAACAACTAATGGATTGCTTGTTGGACTGTGATCCTGGTCTTTCTTGTGATTTGGTGAAGAAATATATTTCACCCTCTTCTACCTGTCCGAGCCATTATGTTGGTGTTATCATGGATGAACCTTCGTCTACACCTAATCCAGGATATATTAATGATGTTCCCCGGTTCATCTGGAATTTTCTAGCAGACATAACTTCTATTCCGAGGAAGAATAATAGCTCAGGTTGTCAACAAGGTTGCAATGGTAAAGACGAGGTTTGCATTAAATTAGAGACTGATGGGAAGGGAGTTTGTGCTCTCTCTACAACCAGGTACGTTCCAGCATATTCTACACGGTTAAAATTCGAATCAGGAATGTGGAGTGTTGTGGCTCCCAATTCCTCTGACGACATGGGGGTTGTGGACCCTGTCTGGACAGAAAGCAACTGGGATTCAATAGGTATGCGGGTCTACATAGTCCAAATTCCTGGTTACGATCGTCTTGTTCTGTTTGCGGGTGTCGCTTTGACAATCTTGGCATACCTTGCAATAGCAATCACAAGAGCTTTAGCTGACAAAGCAATGAAGAGGGATTGA 2010 0.4294 MAQTFISLFFLVFTSHVLSRISGQSSSMESVPDLQKSMYTVVNAYPCVRLLNLSGTIGCSNPGRDKVAASIVRFENVDDISEPSAILVSSDEFPSLFTRISDDPGFASKVGGVLVESRTGSHNTLKGFSPDRKFPQAEFAPYHNFSHEWNPTGSGIMWKSYSFPVFLLTSGGTKTLQEFVLKNEEKKKAYTSNVAEFDLVMQTVKSGTHDSESCLKEATCLPLGGYSVWSSLPPINISSSKPSKPLILTVASMDSASFFRDKNLGADSPISGLIALLAAVDALSHLDGLGDLSKQLVFVVFTGEAWGYLGSRRFLEELDMHSDAVHGLSHSLVETVIEIGSVGKGLSQGAKNFFAHAEGDSSATNQTMVALKRAQESLLSENIKIAAASASNPGIPPSSLMAFLKKNPGISGVVLEDFDSVFVNKFYHSHLDDLSNVNSSSVVAAASLIARTLYILASETKDVQDSTLAAINVNVSLVEQLMDCLLDCDPGLSCDLVKKYISPSSTCPSHYVGVIMDEPSSTPNPGYINDVPRFIWNFLADITSIPRKNNSSGCQQGCNGKDEVCIKLETDGKGVCALSTTRYVPAYSTRLKFESGMWSVVAPNSSDDMGVVDPVWTESNWDSIGMRVYIVQIPGYDRLVLFAGVALTILAYLAIAITRALADKAMKRD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0580 669 SUPERFAMILY Zn-dependent exopeptidases 219 456 - -
Lja6g0580 669 Pfam Nicastrin small lobe 46 203 IPR041084 -
Lja6g0580 669 PANTHER NICASTRIN 18 668 IPR008710 GO:0016021|GO:0016485
Lja6g0580 669 Pfam Nicastrin 246 454 - -
Lja6g0580 669 Gene3D Zn peptidases 173 473 - -
Lja6g0580 669 CDD M28_Nicastrin 42 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0580 K06171 - gmx:100801506 1064.68