Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0572 ATGGAGGACGACCAAGAGACGCGTCTGTCGCAGAAAATCGCAGCGATTCTCGACGACGCTCGAACCTCACTCGCCACGCACAACCGAAAGCTCAAGGAACTAACCCTCCTCCGATCCAAGTCCCCTTCCCCTTCCCATTTCTTCTCCGCTTTCTCCAAATCCCTCACCCCGCTCTTCAACTTCCAACGCCGCCTCGCCTCCGCTGACCGTGCCGTTGCGTTCGTCTCCTCCTTCGCCGCTGCCCGCCCTCCCGCTGACGCCTCCGCTTCCGACGATTTCCTCGACCACTTCCTCAACTTCCTCCTCGTCGCCGCTGCCGCCGCCAACAAAACCGCCAGGTTCCGAGCCTGCCAGATCGTCTCCGAGATAATATTGTGGCTGCCAGATGATGCAGAAGTGAGCAATGACCTATGGGATGAGGTGATAGATTGCATGATGGTGAGGATGCGGGACAAGATCCCTGTGGTGCGTACTTTTGCGATTAGGGCGCTTTCGCGCTTTGTGAATGACACCAGCAACAGTGACATTCTTGATTTGTTCCTTGAGCTGCTTCCCTTGGAACAGAATGCGGATGTTCGTAAGATGATTGTGTTATCTTTGCCCCCTTCTAGTGCAACCTCTCAAGTTATCATTGATTGCACCTTGGATGTGAGTGAATCCGTACGCAAAGCGGCATACTGTGTTCTAGCTAATAAGTTCCCTCTTCATAGCTTAAGCATTAAGCTCAGGACAGTTATTCTTCGAAGCGGACTTGCTGACCGATCTGTTGCTGTCTCAAAGGAATGTTTTAAACTGTTGAAAGATGAATGGCTTATAAAGTGCTGTAATGGTGATCCTTTACAGCTTTTGAAGTATCTTGATGTTGAAACCTATGAATCAGTGAGTGAGTCTGTCATGGAAGCACTTCTAAAAGCTGGTTTAGTTAAACTACAGAATGGTGCAAGTATCCAACAGTATATTTCATCAAATGGTGACACAGCAGAAGGGGACTCAGTTGATTGTCAACCAAGCATTGAGCTGATGGAAGCTGAGGCTGCTCTGTATTGGAGAACTGTGTGCAAGCATTTGCAATCAATAGCACAAGCCATGGGCTCTGATGCTGCAGCCACAACGGGCACTGAAGCAGAAGTGTATGCAGCAGAAGCAACAGATACAAATGACCTTCTAGAAAAAATTCTTCCTGCAACAGTTGATGAATATATAGAGTTGATTAGAGCTCATATCAATGCTGGATCAAACCATCGTTTTGCATCCCGGCAGCTGCTTTTGCTTGGGGCTATGTTTGATTTTTCTGACGCAACAAATAGGAAGACTGCTAGTGCATTTCTGCAGGAGCTGATGAGGAAGCCTCCAGAGCATGAGATTGATAATGAAGGAAATGTTGTTGTTATTGGAGATGGGTTAAGTTTTGGTGGAGACAATGATTGGGCTGAAGCTGTAGCGAGATTGGCAAGGAAAGTTCATGGTGCTTCTGGTGAATTTGAAGAAGCTGTTCTTGCAATCGTAGAAGAGCTGGCTCAACCTTGCAGGGAGAGAACAGCTGATTATGTGCAATGGATGCACAGCCTTTCACTTTCTGGCCTTTTACTTAAAAATGCAGTGTCATTGCGGTTTCTTCAGGGCAAGGCTATTGGAGCAGATGATCTACTCCAATCTTTACTACTTCCAGGGGCAAAACAATCTCACTTGGACGTGCAAAGGATTGCTGTCAGATGTCTTGGCCTTTTTGGGCTTTTGGAAAGGAAACCTAGTGCAGAACTATTGAAACAGCTGAGGACTTCATATATCCAAGGGCCACATTCAATCAGTATAGAGGCCTCTAAAGCATTGATTGATCTTGTAATGTGGCATGGTCCTCAAGAGGTTGATAGGGTTTTAAAGCACACTATTCCGGGCCAAATAAATTGTGACAAGAAAAGTTTTTGTCCTGTGAACTTCTCTGATTTAGAAGGGGATTTGAATGTTGAAACGCTTGATATCTTATATGGTGGCTTTGAAAATGATGACTGGGTTAGTCCTTCAACGAGTAATGATGATGAATGCATTAATGCGGTACTTGGAGAAGGGTTTGCCAAAATTCTTCTTCTAAGCGACAACTATCCAAGCATACATGCCTCTTTGCATCCTGTGCTTTTATCCAAGATCATTTACTTGTACTTCAGTGATGTGTCGGAACACCTGTACAGGTTGAAGCAATGCTTATCTGTTTTCTTTGAGCACTACCCATGTCTTTCAGTCAATCATAAGAGGTGCATATCAAAGGCCTTCATTCCAGTAATGCGTTCAATGTGGCCAGGAATTTTCGGCAACTCCAGTGGTTCTTCTTTTGTGGTGTCTCAGATGCGTAAGCGTGCTGTTCAAGCTTCACGTTTTATGTTGCAGATGCTGCAGATTCCTTTATACATTAAAGAGACTCAACCAGAGAGTGAAAATACTAATACGGAGCAGCCACAAGTTATAGATAGTTGTGCTGAAGTTCCATTTGAGTGTGGTGAAGAGGGGCTTGCGCTTCGCATAGCCATAGAGGTGGCAAGCTTTCACTCGAAGAAGACAGCTGCTGAGAAGTCATATGTGTCAGCATTATGCAGAATACTTGTCTTGCTTCATTTTCGGTTGTCTGAACAAGGGCCAATAAAAATTATGAGGAAACTCCTATGTCGCATGGTTCAATGTGTATCTTCAGAGAAGGATCTTGTTAAAGAATTGACCCGCATGGCTGACCATCTCATCACAGTCGATAGACAACCAGATCAGGATTTGTTGCAAGATGAAGTTAATCTCATTTTGGGGAAATTGGAAATTGACTTCAACCTGGATTTGGATAGTTCTGCTACAATTCCACAAACACCAGCTGTACCCCCAACCAGACCTGCGCGTTCTAGGAGAAGGGTTAGGATTGAGGAAGATAGTTCTTCTGATGAAGAAGTTTCACCTGTTTCTGTGGTTCCTACAACCAATCAGACTGTTAAAAGTCGTTCACAGAGAGCAAGCAAAACTGCAGCAATGAGCAAGATGATGTCTTCTGCCAGGAAATCACTCAAAATCGATGAAGTTGACGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGACTCTGGTGTGACATCTGAAGATTCTGATGAATCGGATCAATAA 3135 0.4501 MEDDQETRLSQKIAAILDDARTSLATHNRKLKELTLLRSKSPSPSHFFSAFSKSLTPLFNFQRRLASADRAVAFVSSFAAARPPADASASDDFLDHFLNFLLVAAAAANKTARFRACQIVSEIILWLPDDAEVSNDLWDEVIDCMMVRMRDKIPVVRTFAIRALSRFVNDTSNSDILDLFLELLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLHSLSIKLRTVILRSGLADRSVAVSKECFKLLKDEWLIKCCNGDPLQLLKYLDVETYESVSESVMEALLKAGLVKLQNGASIQQYISSNGDTAEGDSVDCQPSIELMEAEAALYWRTVCKHLQSIAQAMGSDAAATTGTEAEVYAAEATDTNDLLEKILPATVDEYIELIRAHINAGSNHRFASRQLLLLGAMFDFSDATNRKTASAFLQELMRKPPEHEIDNEGNVVVIGDGLSFGGDNDWAEAVARLARKVHGASGEFEEAVLAIVEELAQPCRERTADYVQWMHSLSLSGLLLKNAVSLRFLQGKAIGADDLLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPSAELLKQLRTSYIQGPHSISIEASKALIDLVMWHGPQEVDRVLKHTIPGQINCDKKSFCPVNFSDLEGDLNVETLDILYGGFENDDWVSPSTSNDDECINAVLGEGFAKILLLSDNYPSIHASLHPVLLSKIIYLYFSDVSEHLYRLKQCLSVFFEHYPCLSVNHKRCISKAFIPVMRSMWPGIFGNSSGSSFVVSQMRKRAVQASRFMLQMLQIPLYIKETQPESENTNTEQPQVIDSCAEVPFECGEEGLALRIAIEVASFHSKKTAAEKSYVSALCRILVLLHFRLSEQGPIKIMRKLLCRMVQCVSSEKDLVKELTRMADHLITVDRQPDQDLLQDEVNLILGKLEIDFNLDLDSSATIPQTPAVPPTRPARSRRRVRIEEDSSSDEEVSPVSVVPTTNQTVKSRSQRASKTAAMSKMMSSARKSLKIDEVDEEEEEEEEEEEDSGVTSEDSDESDQ* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0572 1044 Coils Coil 17 37 - -
Lja6g0572 1044 MobiDBLite consensus disorder prediction 975 1006 - -
Lja6g0572 1044 MobiDBLite consensus disorder prediction 943 1044 - -
Lja6g0572 1044 Gene3D - 58 266 IPR011989 -
Lja6g0572 1044 Coils Coil 1008 1031 - -
Lja6g0572 1044 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 5 1024 IPR027165 GO:0000796|GO:0007076
Lja6g0572 1044 Pfam Nuclear condensing complex subunits, C-term domain 523 870 IPR025977 -
Lja6g0572 1044 SUPERFAMILY ARM repeat 46 910 IPR016024 -
Lja6g0572 1044 MobiDBLite consensus disorder prediction 1018 1044 - -
Lja6g0572 1044 PANTHER CONDENSIN COMPLEX SUBUNIT 3 5 1024 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0572 K06678 - gmx:100812144 1502.26