Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0571 ATGGTTGCTTTGATTTCTCAAGAGAATGCTATTGCATTGGTTTCTCGTACCGGTAGGGAGTTGCAGCGTTATAGAGAAGGTCGTCGCCAAGTTGTGGGATGCATACCCTACAGATTTAAGGTTGGGGAGAAAGCTTCTCTTAATGATTCTGGTGAATTGGAAGTCCTGGTTATTAGTTCTCAGAAAGGCAAAGGGTTGCTATTTCCAAAGGGAGGCTGGGAATTAGACGAATCACAAAAAGAGGCAGCTTTAAGAGAGACCCTGGAGGAAGCAGGGGTTCGAGGCATTGTTGGGGGTAGATTGGGTAAATGGAGCTTCAAGAGCAAGACCCATGATGCTTTATATGAAGGATACATGTTCCCACTACTTGTTCAAGAGCAATTGGAGTTCTGGCCAGAGCAGAACCTTCGTCAAAGAATATGGATGAGCGTCACTGAGGCAAGGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCACTAGACAGGCTTGTAAATCGCCTCACTGGTCAGAAACTCGGTCTCGAGAAGCAAATTCATCTGTGTCCCAAGAACTGCATGGGAGACGCCAAATCTGACTTTAAGTGCATGTTTGGAAATCCCTCTACAGTTGAGTTTGAATCATAA 624 0.4519 MVALISQENAIALVSRTGRELQRYREGRRQVVGCIPYRFKVGEKASLNDSGELEVLVISSQKGKGLLFPKGGWELDESQKEAALRETLEEAGVRGIVGGRLGKWSFKSKTHDALYEGYMFPLLVQEQLEFWPEQNLRQRIWMSVTEAREVCQHWWMKEALDRLVNRLTGQKLGLEKQIHLCPKNCMGDAKSDFKCMFGNPSTVEFES* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0571 207 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Lja6g0571 207 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 177 - -
Lja6g0571 207 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 177 - -
Lja6g0571 207 CDD Nudix_Hydrolase_9 30 157 - -
Lja6g0571 207 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 166 - -
Lja6g0571 207 Pfam NUDIX domain 48 161 IPR000086 -
Lja6g0571 207 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Lja6g0571 207 SUPERFAMILY Nudix 22 167 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0571 Lja-Chr6 13727487 13729567 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0571 K07766 - gmx:100795999 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0571 6 13727487 13729567 Lja6g0571 6 13727487 13729567 PCT