Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0567 ATGGCCAAAACCAAAACGAGCCTCTCTCTCTTAATCTTCGCCAATCTCATTGTTCTTTCACTCTCGTCTTCCCAGCTAGACTTGTTCCTCTACGGCGGGTGCACACAGCAAAGGTACACCCCAAACTCCCCATACGAGCTCAACCTCAACTCGCTCCTCACCTCCCTCGTCAACTCAGCCACCTACTCCTCCTACAACAACTACACCGTTGTAGGTGCTGACGATGTCGCCTACGGCCTCTACCAGTGCCGCGGTGACATCTCCATGCCGGACTGCGCCACCTGCATCTCCCGCGCGGTCTCTCGTGCTGGAGTCTTGTGTCAGGAGGCGCGCGGTGGCGCAGTCCAGCTCGAGGGATGCTACGTGAAGTACGACAATGCCAAGTTCTTGGGGGCCGAAGACAAGACAGTGGTGCTGAGGAAGTGCGGGCCCTCCGCCGGGTACAGCCTCGGCGAGAGGGATGCGGTTCTGTCCGGGCTCGCGGGCTCGGGCGGGTACTTTCGGGTTGGTGGGGCAGGCGGGTTGACGGGCGTGGCGCAGTGCACCGGGGATTTGAGCTATGCGGAGTGCCAGGATTGCGTTTCGGAGGCTATCCGCCGGCTGAGGAGCGAGTGCGCTGCTGCGGATTACGGAGATATGTTCTTGGTCAAGTGTTACGCCAGGTACTCCAATGCTGGGGCCCATGCTTACACCAAGGCCCATGGTAAATCGAACAACAGCGATGGTGAGAAGACATTTGCCATAATTATTGGATTACTAGCAGGTGTAGCTATACTTGTTATTTTCCTTGCTTTCGTGAGGAGGATTTGTGGGGGACAAGGTAAATAA 828 0.57 MAKTKTSLSLLIFANLIVLSLSSSQLDLFLYGGCTQQRYTPNSPYELNLNSLLTSLVNSATYSSYNNYTVVGADDVAYGLYQCRGDISMPDCATCISRAVSRAGVLCQEARGGAVQLEGCYVKYDNAKFLGAEDKTVVLRKCGPSAGYSLGERDAVLSGLAGSGGYFRVGGAGGLTGVAQCTGDLSYAECQDCVSEAIRRLRSECAAADYGDMFLVKCYARYSNAGAHAYTKAHGKSNNSDGEKTFAIIIGLLAGVAILVIFLAFVRRICGGQGK* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0567 275 ProSiteProfiles Gnk2-homologous domain profile. 27 129 IPR002902 -
Lja6g0567 275 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Lja6g0567 275 Pfam Salt stress response/antifungal 173 224 IPR002902 -
Lja6g0567 275 Gene3D - 27 129 IPR038408 -
Lja6g0567 275 Gene3D - 154 226 IPR038408 -
Lja6g0567 275 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 11 271 - -
Lja6g0567 275 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 271 - -
Lja6g0567 275 ProSiteProfiles Gnk2-homologous domain profile. 130 227 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0567 Lja-Chr6 13664841 13667215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0567 22 224 Receptor kinase-like Gene Family AT4G23280 29.412 2.28e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0567 - - gmx:100811615 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0567 6 13664841 13667215 Lja6g0567 6 13664841 13667215 PCT