Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0564 ATGTCAGTCTCATGTGGGGTAGAGTGCGTTTTCGTGCTCGGTTGCGCGCGGTGGCTATGGAAGCGCTGCACCTACATCGGCTCCTACGACAGCGCCACCTGGCCGTCCGCCACTGCGGTCGAGTTCGACCCAGTGCCGCGCGTCTGCCGCCTCATCCTCGCCATCTACGAGCCGGACCTCCAAAACCCGCAGCACTACCAGCTCGCCGGAGGCTACCGCCTGAACCCGGACTGGGTGGTCAAGCGCGTCGCCTACGAGGAGAATGAGGGTAACGCGCCGCCGTACATCATCTACGTCGACCATGAACACCGCGAGATTGTGATGGCGGTGAGGGGGCTGAATTTGGCGAAGGAGAGTGACTACAAGCTGTTGTTGGATAACAAGCTGGGGAAGCAGATGTTTGATGGGGGCTATGTTCATCATGGTTTGTTGAAATCGGCGGTTTGGTTGTTGAACCGGGAATCGGAGACGCTGAAGCAGTTGTGGGTGGAGAATGGTTCGGAGTATGGGATGGTGTTTGCTGGTCACTCTTTGGGGTCTGGGGTGGTGTCGCTGTTGACCATTCTTGTGGTCAATCATAGGGAGCGTTTGGGAGGGATTCCCAAAGAGAAGATTCGGTGTTATGCTGTTGCTCCTGCTAGGTGTATGTCCCTCAATTTGGCCGTCAAATATGCCAATGTCATTCATTCTATTGTGTTGCAGGATGATTTCTTGCCAAGAACTCCCACTCCACTGGAAGATATATTCAAATCAGTATTCTGCTTGCCCTGCTTATTATTCCTGGTTTGCCTGAGAGATACCTTCATACCTGAGGGTCGAAAGCTAAGAGATCCAAGGAGACTTTATGCACCTGGGCGAATGTATCATATTGTGGAAAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTAAGGACTGCTATTCCTGTCGATGGAAGATTTGAGCATATTGTCTTGTCCTGTAATGCAACATCTGATCATGCTATTATTTGGATTGAGAGGGAAGCAGAGAAAGCCTTACAATTAATGAAGGATCATGGTGGCTCCGAAACTGTGACAGTGCCGCCAACAGTACAGAAGTTTGAGAGGTTGAAGACCATAGAAAAAGAACACAAAGATGCTTTAGAAAGAGCTGTTAGCTTAAATGTGCCTCATGCGGTGGACGCTGAAGAGAAAGAACTGTCTGAGAACAATGAAGATGAGGCATCCGGTAGTGGGGGACAAGACAACACCACCACTTCCGCCGCCTCAAGTACCCAATCAAAATCAAGTGTTGCAAGGTCAAACTGGAATGAGGTTGTTGAGAAACTCCTAAAGAAGAATGAAACAGATAAACACATGGAAAATGATACAAATGTCTCACAATAA 1371 0.4931 MSVSCGVECVFVLGCARWLWKRCTYIGSYDSATWPSATAVEFDPVPRVCRLILAIYEPDLQNPQHYQLAGGYRLNPDWVVKRVAYEENEGNAPPYIIYVDHEHREIVMAVRGLNLAKESDYKLLLDNKLGKQMFDGGYVHHGLLKSAVWLLNRESETLKQLWVENGSEYGMVFAGHSLGSGVVSLLTILVVNHRERLGGIPKEKIRCYAVAPARCMSLNLAVKYANVIHSIVLQDDFLPRTPTPLEDIFKSVFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNATSDHAIIWIEREAEKALQLMKDHGGSETVTVPPTVQKFERLKTIEKEHKDALERAVSLNVPHAVDAEEKELSENNEDEASGSGGQDNTTTSAASSTQSKSSVARSNWNEVVEKLLKKNETDKHMENDTNVSQ* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0564 456 MobiDBLite consensus disorder prediction 434 450 - -
Lja6g0564 456 Pfam Lipase (class 3) 107 243 IPR002921 GO:0006629
Lja6g0564 456 MobiDBLite consensus disorder prediction 392 456 - -
Lja6g0564 456 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 450 - -
Lja6g0564 456 MobiDBLite consensus disorder prediction 401 431 - -
Lja6g0564 456 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 450 - -
Lja6g0564 456 Pfam Lipase 3 N-terminal region 7 64 IPR005592 GO:0016042
Lja6g0564 456 CDD Lipase_3 41 243 - -
Lja6g0564 456 SUPERFAMILY alpha/beta-Hydrolases 41 244 IPR029058 -
Lja6g0564 456 Gene3D alpha/beta hydrolase 35 257 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0564 Lja-Chr6 13558300 13562562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0564 1 343 Miscellaneous Gene Families AT5G37710 75.802 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0564 - - gmx:100798831 751.51