Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0550 ATGATGGAAATAAGCATTGCAAGGTGTCATCTCGAAACAAACGGGATTTTCTTTTTCGATATCTCAAGAACAATAGGACGGGAAAACACTCAGAAGCTTTCTTTTCATGTGGCTGCCCTGAATTCTAGGTGGGACTTGCACAGATTGGCGTCTTCCTATCAAGCTTTTACTGCAGTGTATCCAAGAAGGCCTTTTTCCTGCAGAACACTTTCTACGCCCATTAGTTTAGGGTCTGCATCATTACAATCTGGAGATAAGTCTAGTGAGGATGTGGATCCATATGCAGACTCAGAAGAGGGAACATTGGCACATCCTTTAACCAGTGAACAGATAAGGGCACTGCTTGCTGATACTGAAAGAACAAAACTCACTAAGAAGCTTAGTGAAGCCAACCAGCAAAACAGATTCCTCAAAAGACAGTTGCATGTAAAGGAGGATGCATTGGTAAAATTTAAAAGTGACCTTGCTGTCATGGAGCTTGAAATTCAGGCTTTGGCCAGACTAGCAGAAGAAATAGCTCAATCTGGTATTCCAGAACGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCTAGATTAGAAGCTGTACATGAACAATTGAAGGAACAAATAAAGGATGTTGGTGCGGCACAATCGAAGCAGGTCTCTGTATTTTGGGTTGGCATGGCTGAGAGTGTGCAAGTTATGGGCACCTTTGATGGTTGGAGCCAAGGAGAGCACCTTTCACCTGAGTACACTGGTTCTTACACAAGGTTCTCAACAACATTGATGCTCAGGCCAGGAAGGTATGAAATCAAATTCTTAGTAGATGGGGAATGGAAGCTGTCACCGGAGTTCCCGCTTACTGGTGAAGGGTTAACAAAAAATAATTTGTTAATTGTTGAGTGA 900 0.4244 MMEISIARCHLETNGIFFFDISRTIGRENTQKLSFHVAALNSRWDLHRLASSYQAFTAVYPRRPFSCRTLSTPISLGSASLQSGDKSSEDVDPYADSEEGTLAHPLTSEQIRALLADTERTKLTKKLSEANQQNRFLKRQLHVKEDALVKFKSDLAVMELEIQALARLAEEIAQSGIPERSRKINGKYIHSHLVARLEAVHEQLKEQIKDVGAAQSKQVSVFWVGMAESVQVMGTFDGWSQGEHLSPEYTGSYTRFSTTLMLRPGRYEIKFLVDGEWKLSPEFPLTGEGLTKNNLLIVE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0550 299 MobiDBLite consensus disorder prediction 78 99 - -
Lja6g0550 299 Coils Coil 194 214 - -
Lja6g0550 299 Pfam Glycogen recognition site of AMP-activated protein kinase 220 289 IPR032640 -
Lja6g0550 299 PANTHER PROTEIN PTST, CHLOROPLASTIC 3 299 - -
Lja6g0550 299 CDD E_set_AMPKbeta_like_N 219 298 - -
Lja6g0550 299 Coils Coil 120 147 - -
Lja6g0550 299 SUPERFAMILY E set domains 219 298 IPR014756 -
Lja6g0550 299 Gene3D Immunoglobulins 210 298 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0550 Lja-Chr6 13055253 13065155 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0550 - - lja:Lj6g3v0433940.2 541.962