Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0537 ATGGGAGATCCATCGGAGACGATGGGATCGGAAGGTTTTGATTCTCGCACCGCCGCCGACCTCTGCATGGAAATCGATCCGCCATTTCAGGAAAACGCGGTAACCGCCGAGGATTGGCGGAAAGCGCTCAACAGAGTCGTCCCCGCCGTCGTCGTCCTCCGCACCACCGCCACTCGCTCATTCGATACTGAGTCCGCCGCCGCCAGCTACGCCACCGGCTTCATCGTTGATAAGCGCCGCGGTATTATCCTCACCAATCGCCATGTTGTCAAGCCAGGACCTGTTGTTGCAGAAGCCATGTTTTTGAACCGTGAAGAGGTGCCGGTGCATCCGATATACAGAGATCCGGTACATGATTTTGGATTCTTTCGGTATGATCCGAGTGCTATACAATTTCTAAACTATGACGAGATACCACTTGCTCCTGAGGCTGCAAGTGTTGGACTAGAAATCAGAGTTGTTGGTAATGATAGTGGAGAGAAGGTTTCCATTTTGGCGGGTACTCTTGCTCGTTTGGATAGGGATGCTCCTCACTATAAGAAGGATGGGTATAATGACTTCAACACATTCTATATGCAAGCTGCATCTGGGACCAAAGGAGGATCAAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCAGTGGCCCTGAATGCTGGGAGCAAGTCATCAAGTTCATCAGCATTCTTTTTACCATTAGAACGAGTTGTAAGGGCATTAAGGTATCTTCAAAAGGACAATGAAACTTATGTTGATAAATGGAAGGCAGTTTCTATTCCTCGTGGCACACTTCAGGTGACGTTTCTTCACAAAGGGTTTGACGAGACTCGCCGGCTTGGTCTTAGAAGTGAGACGGAGCAGATAGTACGCCATGCTTCTCCAGCCAGTGAGACTGGAATGCTTGTTGTGGACTCTGTGGTGCCAGGCGGCCCAGGTTATAAACATTTGGAACCTGGTGATGTACTTGTTCGAGTCAATGGGGAGGTCACTACTCAATTCCTTAAACTGGAGATTGTACTTGATGACAGTGTAAACTCAAATATTGAATTACAAATTGAAAGGGGTGGAGCATCAAAGAGTTTAACTTTGTTGGTGCAAGATTTGCACTCAATAACTCCTGATTATTTCTTAGAAGTTAGTGGGGCAATAATACATCCTCTTTCTTATCAGCAGGCTAGAAACTTCCGCTTCAATTGTGGTCTTGTTTATGTGACTGAACCAGGATATATGCTCTTTAGAGCAGGAGTTCCTCGTCATGCAATAATAAAGAAGTTTGCCGGTGAAGAAATATCTTGTCTTGAGGAACTTATATCTGTTCTCTCTAAGCTATCTAGGGGTGCTCGTGTACCATTGGAGTATATAAGCTATATTGACCGTCATAGAAGGAAGTCTGTGTTGGTGACAGTTGATCGTCATGAATGGTATGCACCACCTCAGATATACACTCGTGATGACAGTACTGGCCTCTGGATTGCTAAGCCGGCCTTTCTGCCTGATTCGCTTTATCTATCATCTCGTGCTAAAGATGTTGGAAATCCAGCCAGACAGCCAGTTTCACTATCTGGTGAGCATGCATGTGGGAGACATATGTCTGAAGGTAACAATTGTGAGTTGGTTGATGGTGTCACTAGCATGGAAACCAATCATGAAGATCCTTCAGAGTATGTATCTCACCATAATGCATCTGACGGCGTGGTTAAAAAACGGAGAGTAGATGAAGATTTATCAACTGATGGAAGTGCTGTTGCTGATTCTTCCTTAAATGAAACCCAGGAAACTAAGCTAGAAAAATCAAGCATTATACAGGATGATGGGTTAATGGACTACCAAGGTGCAACGGCTGCCACTGCAAATTCATCTGTTGCTGAACGTGTGATTGAGCCTACTCTTGTGATGTTTGAGGTTCATGTTCCTCCATCTTGTATGCTTGATGGTGTTCATTCGCAGCATTTTTTTGGGACGGGTGTCATAATATATCACTCTCATGATATGGGATTAGCTGCAGTTGACAAAAATACTGTTGCAATATCTTCCTCTGATGTGATGCTCTCGTTCGCTGCTTTTCCGGTTGAAATTCCAGGAGAGGTGGTTTTTCTGCATCCTGTTCACAATTATGCTCTCATATCATATGATCCCTCTGCTTTGGGACCTGTTGGTGCTTCAGTAGTCCGTGCTGCAAAGTTACATCCAGAGCCTGCACTACGTCGAGGGGATTCTGTTTATCTTGTGGGGTTAAGTAGAAGCCTTCAAGCAACTTCTAGGATATCAGTTGTTACCAATCCTTGTGCTGCATTGAATATAGGATCTGCTGATTCTCCACGCTACAGAGCAACCAATATGGAAGTAATTGAGCTTGATACTGATTTTGGTAGTACATTTTCGGGTGTGCTCACAGATGAACAAGGAAGAGTCCGAGCTATATGGGGAAGCTTCTCTACTCAGTTGAAATTTGGTGGCAGTACATCAGAAGATCATCAATTTGTGAGGGGTATTCCGATTTATGCAATAAGTCAGGTCCTTGACAAGATTGTTTCTGGTGCAAACGGGCCACCTCTTCTCATAAATGGTGTCAAAAGACCTATGCCTCTTGTCAGAATTCTAGAAGTTGAACTTTATCCAACGTTACTTTCAAAGGCTCGGAGTTTTGGACTAAGTGATGATTGGATTCAGGCGCTTGTTAAGAAGGATCCAATAAGACGACAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAACCTTTTAGAGCAAGGGGACATGGTTTTAGCAATCAATAAAGAACCAGTCACCTGTTTCGGTGACATAGAAAATGCTTGCCAAGCTTTAGACAAATCTGATGCCAATGATGGGAAGCTTAATCTGACTATTTTCCGGCAGGGACGAGAGGTTGAACTTCTTGTGGGAACAGATGTTAGGGATGGAAATGGAACGGCTCGTACAATTAATTGGTGTGGTTGTGTTGTTCAAGATCCACATCCAGCAGTACGTGCACTTGGATTTCTTCCTGAAGAAGGTCATGGTGTATATGTTGCCAGGTGGTGTCATGGGAGTCCTGTACATAGATATGGTCTCTATGCTCTTCAGTGGATAGTTGAAATAAATGGAAAACCAACACCAAATATAGATGCTTTTGTTGCTGTGACAAAGGAACTGGAGCATGGAGAGTTTGTTCGTATAAGGACAATTCACCTCAATGGGAAGCCACGAGTCTTAACATTGAAGCAAGACTTGCACTACTGGCCTACATGGGAATTGAGGTTTGATCCAGACACTGCAATTTGGCGTCGTAAGATAATCAAGGCATTGAGTTGCACTTCTGTATGTGAATAA 3339 0.4438 MGDPSETMGSEGFDSRTAADLCMEIDPPFQENAVTAEDWRKALNRVVPAVVVLRTTATRSFDTESAAASYATGFIVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPSAIQFLNYDEIPLAPEAASVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVALNAGSKSSSSSAFFLPLERVVRALRYLQKDNETYVDKWKAVSIPRGTLQVTFLHKGFDETRRLGLRSETEQIVRHASPASETGMLVVDSVVPGGPGYKHLEPGDVLVRVNGEVTTQFLKLEIVLDDSVNSNIELQIERGGASKSLTLLVQDLHSITPDYFLEVSGAIIHPLSYQQARNFRFNCGLVYVTEPGYMLFRAGVPRHAIIKKFAGEEISCLEELISVLSKLSRGARVPLEYISYIDRHRRKSVLVTVDRHEWYAPPQIYTRDDSTGLWIAKPAFLPDSLYLSSRAKDVGNPARQPVSLSGEHACGRHMSEGNNCELVDGVTSMETNHEDPSEYVSHHNASDGVVKKRRVDEDLSTDGSAVADSSLNETQETKLEKSSIIQDDGLMDYQGATAATANSSVAERVIEPTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHSHDMGLAAVDKNTVAISSSDVMLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGASVVRAAKLHPEPALRRGDSVYLVGLSRSLQATSRISVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSTFSGVLTDEQGRVRAIWGSFSTQLKFGGSTSEDHQFVRGIPIYAISQVLDKIVSGANGPPLLINGVKRPMPLVRILEVELYPTLLSKARSFGLSDDWIQALVKKDPIRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFGDIENACQALDKSDANDGKLNLTIFRQGREVELLVGTDVRDGNGTARTINWCGCVVQDPHPAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPNIDAFVAVTKELEHGEFVRIRTIHLNGKPRVLTLKQDLHYWPTWELRFDPDTAIWRRKIIKALSCTSVCE* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0537 1112 MobiDBLite consensus disorder prediction 551 577 - -
Lja6g0537 1112 MobiDBLite consensus disorder prediction 579 595 - -
Lja6g0537 1112 PRINTS HtrA/DegQ protease family signature 210 227 IPR001940 GO:0004252|GO:0006508
Lja6g0537 1112 PRINTS HtrA/DegQ protease family signature 147 171 IPR001940 GO:0004252|GO:0006508
Lja6g0537 1112 PRINTS HtrA/DegQ protease family signature 188 205 IPR001940 GO:0004252|GO:0006508
Lja6g0537 1112 PRINTS HtrA/DegQ protease family signature 81 93 IPR001940 GO:0004252|GO:0006508
Lja6g0537 1112 PRINTS HtrA/DegQ protease family signature 315 327 IPR001940 GO:0004252|GO:0006508
Lja6g0537 1112 Pfam Trypsin-like peptidase domain 71 217 - -
Lja6g0537 1112 SUPERFAMILY PDZ domain-like 301 399 IPR036034 GO:0005515
Lja6g0537 1112 CDD PDZ_serine_protease 277 363 - -
Lja6g0537 1112 Gene3D - 142 254 IPR043504 -
Lja6g0537 1112 SUPERFAMILY PDZ domain-like 1008 1094 IPR036034 GO:0005515
Lja6g0537 1112 SUPERFAMILY PDZ domain-like 904 1006 IPR036034 GO:0005515
Lja6g0537 1112 SUPERFAMILY Trypsin-like serine proteases 629 843 IPR009003 -
Lja6g0537 1112 Pfam PDZ domain 302 354 IPR041489 -
Lja6g0537 1112 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 18 1105 - -
Lja6g0537 1112 SUPERFAMILY Trypsin-like serine proteases 37 243 IPR009003 -
Lja6g0537 1112 Gene3D - 902 976 IPR036034 GO:0005515
Lja6g0537 1112 Gene3D - 275 371 IPR036034 GO:0005515
Lja6g0537 1112 Gene3D - 983 1081 IPR036034 GO:0005515
Lja6g0537 1112 PANTHER PROTEASE DO-LIKE 7 18 1105 - -
Lja6g0537 1112 Pfam PDZ-like domain 980 1056 IPR025926 -
Lja6g0537 1112 Pfam PDZ-like domain 370 443 IPR025926 -
Lja6g0537 1112 Gene3D - 26 137 IPR043504 -
Lja6g0537 1112 SMART pdz_new 999 1068 IPR001478 GO:0005515
Lja6g0537 1112 SMART pdz_new 878 963 IPR001478 GO:0005515
Lja6g0537 1112 SMART pdz_new 277 356 IPR001478 GO:0005515
Lja6g0537 1112 MobiDBLite consensus disorder prediction 546 596 - -
Lja6g0537 1112 ProSiteProfiles PDZ domain profile. 266 356 IPR001478 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0537 K22686 - gmx:100809144 2034.22