Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0504 ATGGGTTCGAATCTGGAACTAGTGCCCATTACATCACAAAAACATGATCCTGCATGGAGGCATGTTCAGATGTTTAAGAGTGGGGAAAAGGTGCAGCTGAAGTGTATATATTGTCTCAAAATGTTCAAGGGTGGTGGGATTCATAGGATTAAGGAACACCTTGCTTGTCATAAAGGCAATGCGTCGATGTGCAGTCATGTTCCCAATGATGTTAGGGTTCAAATGCAGGAAAGTTTGGATGGGGTTGTGGTGAAGAAGAGGAAGAAGCAGAAAATTGAGGAGGAGATCATGAGTGTTGGTGCTCTGGCTAATAGTGCTGCCAATACAGTTGCCAATCTGGTGGATGTTAATCAGGGGGTTCAGTCTATTGAAGTGCAGAATCCAGTGGAACAGAATGCGGGTCTGGTGGTGCATCCTGAAGTGGGAATCAGTAACAATGTAGAAAGAAGGAAGAAAATAAGAGCCAGCAGAAATCCTGCACCAATTCATACAAACTCTGCGGGTGCTGTTGCTGCTATTGAGAATAATGCCATTTTCCCCAAAAGGATGGACAGTCGCATTCACATGGCGATAGGTCGGTTTTTGTACGATATTGGTGCACCTTTTGATGCTGTGAAATCAATCTATTTTCAGCAAATGGTTGAAGCAATTGCTTCGGTGGGCTCGGGTATTCAGTGTCCCTCGCATCATGAACTTCAGGGTTGGATCCTGAAAAACTCTATGGAAGAAGTGAAGAATGATATAGACAGATGCAAGATGACATGGGGGAGGACTGGCTGTACAATTTTGGTTGACCAATGGACTACAGAAACTGGTAGAGTACTGATAAGTTTTCTGGCATATTGTCCTGAAGGCATAGTCTTTTTGAGATCCTTGGATGCAACTGAGATTTCCACTTCCCCGGGATTTCTCTATGAGTTATTAAAACAAGTAGTAGAAGAAGTTGGAGTTGGGCAAGTGGTGCAAGTGATTACATCAGGAGAAGAACATTATGCTGTTGCTGGGAAACGGCTAACTGATACTTTTCCTTCCCTTTATTGGAGTCCATCTGTTGCTCATTGCATTGGTTTGATACTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGTAGTGATTGAACAGGCTAAATCTGTAACAAGATTTGTCTACAATTATAGTGAAATTTTGAATATGGTTAAAAGGTATACATTAGGGAATGATATCGTGGATCCCTCTATTTCGCGATTTGCAACCAACTTCAGCACATTGAAAAGAATGGTTGATCTTAAACACAATTTACAGGCCATGGTCACTTCTCAGGAGTGGATGGATTGCCCATATTCAAAGAGAACAGCAGGTTTGGAAATGTTAGATTGCCTAAGCAATCAAACATTTTGGTCATCGTGTGACATGATTGTTCGTCTAACTGCTCCTCTCTTGAGAATTCTGAGAATAGCTACTAGTGAGATGAGACCGGCATTGGGATACGTGTATGCTGGAATGTACCGGGCAAAAGAAGCAATTAAGAAAGCACTTGTTAAGAGGGAGGATTATATGGTGTACTGGAATATCATTCATCATAGATGGGAAAGGCTGTGGCATCATCCTCTTCATGCTGCAGGCTTCTTCCTTAATCCAAAGTTCTTCTATAGTATTCAAGGGGATGTACATAGTGAGATTCTCTCAGGGATGTTTGACTGTATAGAGAGATTGGTACCTGATACAAGAGTCCAAGATAAAATTATCAAAGAGGTAAACTTATACAAGGCTGCTGCTGGAGACTTTGGGAGAAAGATGGCAGTCAGAGCTAGGGATAATCTGCTTCCTTCTGAATGGTGGTCTACATATGGAGGAGGCTGCCCTAACTTGTCTCGGTTAGCCATTCGTATTCTCAGCCAAGCATCCAGTGTGATGCCCTGCAAGAGAAACAAGATTCCTTTTGAACAATTAACCAATACAAGGAATTTTATAGAGCGCCAACATCTTACTGATCTTGTCTTTGTTCATTACAACTTACGATTAAGACAAATGTATATGAGTAAAGAACAGGATTCTAAGGATCCCCTGTCATTTGACAGCACTAGTAACGTTGAAGACTGGATCAGGCCAATGGAATTTTACTCAGAAGAGTATGGGAACTCGGATTGGATGGCACTGGATCCATCTTCTGTTAACACAATGCTTTTAAGGCCTTTAAATGACGAAACTGAAGAATTGGGTGAAGGGTTTGATGATCTTGAAATTTTCAGTTATCTGAAAGATGATGAGAATGAAAGCACTGGAGACAAGTTGGTAAACCCTTAG 2283 0.4148 MGSNLELVPITSQKHDPAWRHVQMFKSGEKVQLKCIYCLKMFKGGGIHRIKEHLACHKGNASMCSHVPNDVRVQMQESLDGVVVKKRKKQKIEEEIMSVGALANSAANTVANLVDVNQGVQSIEVQNPVEQNAGLVVHPEVGISNNVERRKKIRASRNPAPIHTNSAGAVAAIENNAIFPKRMDSRIHMAIGRFLYDIGAPFDAVKSIYFQQMVEAIASVGSGIQCPSHHELQGWILKNSMEEVKNDIDRCKMTWGRTGCTILVDQWTTETGRVLISFLAYCPEGIVFLRSLDATEISTSPGFLYELLKQVVEEVGVGQVVQVITSGEEHYAVAGKRLTDTFPSLYWSPSVAHCIGLILEDFGNLEWISVVIEQAKSVTRFVYNYSEILNMVKRYTLGNDIVDPSISRFATNFSTLKRMVDLKHNLQAMVTSQEWMDCPYSKRTAGLEMLDCLSNQTFWSSCDMIVRLTAPLLRILRIATSEMRPALGYVYAGMYRAKEAIKKALVKREDYMVYWNIIHHRWERLWHHPLHAAGFFLNPKFFYSIQGDVHSEILSGMFDCIERLVPDTRVQDKIIKEVNLYKAAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQASSVMPCKRNKIPFEQLTNTRNFIERQHLTDLVFVHYNLRLRQMYMSKEQDSKDPLSFDSTSNVEDWIRPMEFYSEEYGNSDWMALDPSSVNTMLLRPLNDETEELGEGFDDLEIFSYLKDDENESTGDKLVNP* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0504 760 PANTHER OSJNBA0013A04.12 PROTEIN 11 734 - -
Lja6g0504 760 Pfam Protein of unknown function (DUF 659) 227 378 IPR007021 -
Lja6g0504 760 ProSiteProfiles Zinc finger BED-type profile. 13 71 IPR003656 GO:0003677
Lja6g0504 760 SUPERFAMILY Ribonuclease H-like 260 667 IPR012337 -
Lja6g0504 760 Pfam hAT family C-terminal dimerisation region 593 665 IPR008906 GO:0046983
Lja6g0504 760 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 11 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0504 Lja-Chr6 12163881 12166714 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0504 - - aprc:113850304 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0504 6 12163881 12166714 Lja6g0504 6 12163881 12166714 ECH