Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0502 ATGGCTGCCTCTGTTTCCACTATTGGAACTGTCAAAACTCCATTGAGCTTGAATGGTTCTGGAGCTGGAGCTTCAGTTCCCAGTTCAGCTTTCTTTGGCAGCAGCTTGAAGAAAGTTATCTCAAGGCTCCCCAACACCAAGGTTTCCAATGGAAGCTTCAAAATTGTTGCTGCAGAGATTGATGAGAGCAAGCAGACTGACGGAGACAGATGGAGGGGTCTGGCCTACGATATTTCCGATGACCAGCAAGACATCACAAGAGGGAAGGGCATGGTTGACCCCCTCTTCCAAGCTCCACAGAATGCCGGAACTCACTATGCAGTCATGAGCTCTTATGAGTACATTAGCACCGGTCTTCGCCAGTACAACTTTGACAACACCGAGGGTGGATTTTACATTGCTCCCGCTTTCATGGACAAGCTTATTGTTCACATCACCAAGAACTTCTTGACCCTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATCTGGGGGGGCAAAGGACAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCCAAAAGATGGGAATCAACCCCATCATGATGAGTGCTGGAGAGCTGGAAAGTGGAAATGCAGGAGAACCCGCGAAGTTGATCAGGCAGAGATACCGCGAAGCTGCTGATATAATCAGGAAGGGAAAGATGTGTGCTCTCTTCATCAACGATCTTGATGCAGGTGCAGGTCGTATGGGTGGAACCACCCAGTACACTGTCAACAACCAGATGGTTAACGCCACCCTCATGAACATTGCTGATAACCCCACAAATGTGCAGCTCCCCGGCATGTACAACAAGGAAGACAACCCCCGTGTGCCCATCGTTGTCACCGGTAACGATTTCTCAACACTGTATGCTCCTCTCATCCGTGACGGGCGTATGGAGAAGTTCTACTGGGCGCCTACAAGGGAAGACCGCATCGGTGTCTGCAAGGGGATTTTCCAAACTGACAATGTGTCTGAAGAGGCTGTTGTCACGATTGTTGACACCTTCCCTGGTCAATCCATCGATTTCTTTGGTGCATTGAGGGCTAGAGTGTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTTGGTGTTGATTTGATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGACCTCCAGTATTTGAGCAGCCCAAGATGACCCTGGAGAAGCTCTTGGAGTATGGTAACATGCTTGTGCAAGAACAAGAGAATGTGAAGAGAGTCCAGTTGGCTGACAAGTACTTGAATGAAGCTGCTCTTGGTAATGCTAATGACGATGCTATCAAGAGGGGAACTTTCTAA 1308 0.4817 MAASVSTIGTVKTPLSLNGSGAGASVPSSAFFGSSLKKVISRLPNTKVSNGSFKIVAAEIDESKQTDGDRWRGLAYDISDDQQDITRGKGMVDPLFQAPQNAGTHYAVMSSYEYISTGLRQYNFDNTEGGFYIAPAFMDKLIVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVFQKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFQTDNVSEEAVVTIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDLIGKKLVNSKEGPPVFEQPKMTLEKLLEYGNMLVQEQENVKRVQLADKYLNEAALGNANDDAIKRGTF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0502 435 PANTHER ATPASE, AAA-TYPE, CORE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 1 435 - -
Lja6g0502 435 Pfam ATPase family associated with various cellular activities (AAA) 163 304 IPR003959 GO:0005524|GO:0016887
Lja6g0502 435 Gene3D - 123 307 IPR027417 -
Lja6g0502 435 Gene3D - 308 420 - -
Lja6g0502 435 PANTHER - 1 435 IPR044960 -
Lja6g0502 435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0502 Lja-Chr6 12135806 12140209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0502 - - lja:Lj2g3v2614070.1 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0502 6 12135806 12140209 Lja6g0502 6 12135806 12140209 ECH